RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SHISA4Q96DD7 197 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 ATP8A2Q9NTI2 1148 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 AGTPBP1Q9UPW5 1226 aa17.58■□□□□ 0.4
SF3B5-201ENST00000367569 DOCK3Q8IZD9 2030 aa17.57■□□□□ 0.4
SF3B5-201ENST00000367569 MPHOSPH10O00566 681 aaKnown RBP17.57■□□□□ 0.4
SF3B5-201ENST00000367569 APPP05067 770 aa17.57■□□□□ 0.4
SF3B5-201ENST00000367569 TDO2P48775 406 aa17.57■□□□□ 0.4
SF3B5-201ENST00000367569 NMIQ13287 307 aaPredicted RBP17.57■□□□□ 0.4
SF3B5-201ENST00000367569 MTMR2Q13614 643 aa17.57■□□□□ 0.4
SF3B5-201ENST00000367569 RAB3GAP1Q15042 981 aa17.57■□□□□ 0.4
SF3B5-201ENST00000367569 CTR9Q6PD62 1173 aa17.57■□□□□ 0.4
SF3B5-201ENST00000367569 ZNF280CQ8ND82 737 aa17.57■□□□□ 0.4
SF3B5-201ENST00000367569 SMCR8Q8TEV9 937 aaPredicted RBP17.57■□□□□ 0.4
SF3B5-201ENST00000367569 GREB1LQ9C091 1923 aaPredicted RBP17.57■□□□□ 0.4
SF3B5-201ENST00000367569 USP17L5A8MUK1 530 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 MINDY4BA8MYZ0 360 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 CCL5P13501 91 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 GABPAQ06546 454 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 CERKLQ49MI3 558 aaPredicted RBP17.56■□□□□ 0.4
SF3B5-201ENST00000367569 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 TATDN1Q6P1N9 297 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
SF3B5-201ENST00000367569 ASNSP08243 561 aa17.55■□□□□ 0.4
SF3B5-201ENST00000367569 AKR1B1P15121 316 aa17.55■□□□□ 0.4
SF3B5-201ENST00000367569 GSPT1P15170 499 aaKnown RBP17.55■□□□□ 0.4
SF3B5-201ENST00000367569 FLT3LGP49771 235 aa17.55■□□□□ 0.4
SF3B5-201ENST00000367569 ABCB5Q2M3G0 1257 aa17.55■□□□□ 0.4
SF3B5-201ENST00000367569 LRRFIP1Q32MZ4 808 aaKnown RBP17.55■□□□□ 0.4
SF3B5-201ENST00000367569 HABP4Q5JVS0 413 aaKnown RBP17.55■□□□□ 0.4
SF3B5-201ENST00000367569 C12orf60Q5U649 245 aa17.55■□□□□ 0.4
SF3B5-201ENST00000367569 AMOTL1Q8IY63 956 aa17.55■□□□□ 0.4
SF3B5-201ENST00000367569 ANKRD13CQ8N6S4 541 aa17.55■□□□□ 0.4
SF3B5-201ENST00000367569 PROCA1Q8NCQ7 364 aaPredicted RBP17.55■□□□□ 0.4
SF3B5-201ENST00000367569 ARPP21Q9UBL0 812 aaPredicted RBP17.55■□□□□ 0.4
SF3B5-201ENST00000367569 BIN2Q9UBW5 565 aaPredicted RBP17.55■□□□□ 0.4
SF3B5-201ENST00000367569 TNPO2O14787 897 aaKnown RBP17.54■□□□□ 0.4
SF3B5-201ENST00000367569 FOXP2O15409 715 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 ADCY3O60266 1144 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 GJB1P08034 283 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 SEPT2Q15019 361 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 ZNF589Q86UQ0 364 aaPredicted RBP17.54■□□□□ 0.4
SF3B5-201ENST00000367569 SLAIN1Q8ND83 568 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 FEZ1Q99689 392 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 RNF208Q9H0X6 261 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 OSBPL3Q9H4L5 887 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 AS3MTQ9HBK9 375 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
SF3B5-201ENST00000367569 ELNP15502 786 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 GUCY1A2P33402 732 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 GJA8P48165 433 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 CDK8P49336 464 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 UBXN2AP68543 259 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 SH3D19Q5HYK7 790 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 IFNL3Q8IZI9 196 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 ACER1Q8TDN7 264 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 UNC93B1Q9H1C4 597 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 PNMA3Q9UL41 463 aa17.53■□□□□ 0.4
SF3B5-201ENST00000367569 PRDM1O75626 825 aa17.52■□□□□ 0.4
SF3B5-201ENST00000367569 FAM110CQ1W6H9 321 aa17.52■□□□□ 0.4
SF3B5-201ENST00000367569 TTC22Q5TAA0 569 aa17.52■□□□□ 0.4
SF3B5-201ENST00000367569 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
SF3B5-201ENST00000367569 NKX2-3Q8TAU0 364 aa17.52■□□□□ 0.4
SF3B5-201ENST00000367569 PCDH10Q9P2E7 1040 aa17.52■□□□□ 0.4
SF3B5-201ENST00000367569 ROBO3Q96MS0 1386 aa17.52■□□□□ 0.39
SF3B5-201ENST00000367569 PEX10O60683 326 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 NEFLP07196 543 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 SDSP20132 328 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 IRF5Q13568 498 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 U2AF1L4Q8WU68 220 aaKnown RBP17.51■□□□□ 0.39
SF3B5-201ENST00000367569 WDR18Q9BV38 432 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 NAPBQ9H115 298 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 ASCC2Q9H1I8 757 aaPredicted RBP17.51■□□□□ 0.39
SF3B5-201ENST00000367569 CABP5Q9NP86 173 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 SWAP70Q9UH65 585 aa17.51■□□□□ 0.39
SF3B5-201ENST00000367569 PARP14Q460N5 1801 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 H0YGN5 161 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 INHAP05111 366 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 GNAT2P19087 354 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
SF3B5-201ENST00000367569 BACE1P56817 501 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.392e-8■■□□□ 12.5
SF3B5-201ENST00000367569 CWC27Q6UX04 472 aaKnown RBP17.5■□□□□ 0.39
SF3B5-201ENST00000367569 UBE2Q1Q7Z7E8 422 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 PXYLP1Q8TE99 480 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 COA7Q96BR5 231 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 DIAPH3Q9NSV4 1193 aa17.5■□□□□ 0.39
SF3B5-201ENST00000367569 COLQQ9Y215 455 aaPredicted RBP17.5■□□□□ 0.39
SF3B5-201ENST00000367569 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 TRIOBPQ9H2D6 2365 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
SF3B5-201ENST00000367569 USP17L10C9JJH3 530 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 ATP2B2Q01814 1243 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 CTDSPL2Q05D32 466 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 IL25Q9H293 177 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 EMILIN3Q9NT22 766 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 TMOD4Q9NZQ9 345 aa17.49■□□□□ 0.39
SF3B5-201ENST00000367569 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms