RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 IWS1Q96ST2 819 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 NAP1L3Q99457 506 aaPredicted RBP11.35□□□□□ -0.59
ATF3-206ENST00000366987 CORO1BQ9BR76 489 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 EXOC1Q9NV70 894 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 IGSF1Q8N6C5 1336 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 FRMD3A2A2Y4 597 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 GOLGA8AA7E2F4 631 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 PRPF6O94906 941 aaKnown RBP11.35□□□□□ -0.59
ATF3-206ENST00000366987 NPTXRO95502 500 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 VIMP08670 466 aaKnown RBP11.35□□□□□ -0.59
ATF3-206ENST00000366987 CCDC166P0CW27 439 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 GNAT1P11488 350 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 KCNA2P16389 499 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 NEK2P51955 445 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 HDAC4P56524 1084 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 PPP2R3AQ06190 1150 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 E4F1Q66K89 784 aaPredicted RBP11.35□□□□□ -0.59
ATF3-206ENST00000366987 RBM43Q6ZSC3 357 aaKnown RBP11.35□□□□□ -0.59
ATF3-206ENST00000366987 TMEM110Q86TL2 294 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 SESTD1Q86VW0 696 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 LRRC49Q8IUZ0 686 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 ARL10Q8N8L6 244 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 GCC1Q96CN9 775 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 ZNHIT6Q9NWK9 470 aaKnown RBP11.35□□□□□ -0.59
ATF3-206ENST00000366987 ATXN10Q9UBB4 475 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 PARP3Q9Y6F1 533 aa11.35□□□□□ -0.59
ATF3-206ENST00000366987 WNK3Q9BYP7 1800 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 RNF40O75150 1001 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 U2AF1L5P0DN76 240 aaPredicted RBP11.34□□□□□ -0.59
ATF3-206ENST00000366987 IRAK1P51617 712 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
ATF3-206ENST00000366987 U2AF1Q01081 240 aaKnown RBP eCLIP11.34□□□□□ -0.59
ATF3-206ENST00000366987 ATP2B2Q01814 1243 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 LMNB2Q03252 620 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 CYB5D1Q6P9G0 228 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 TMC6Q7Z403 805 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 HOMER1Q86YM7 354 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 UNC5CLQ8IV45 518 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 NEK9Q8TD19 979 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 YIPF3Q9GZM5 350 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 STRN4Q9NRL3 753 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
ATF3-206ENST00000366987 TUBGCP4Q9UGJ1 667 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 ITM2BQ9Y287 266 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 CDHR2Q9BYE9 1310 aa11.34□□□□□ -0.59
ATF3-206ENST00000366987 PARP4Q9UKK3 1724 aaKnown RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 EVI5O60447 810 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 URI1O94763 535 aaPredicted RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 GNL2Q13823 731 aaKnown RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 CASP8Q14790 479 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 PRPF40BQ6NWY9 871 aaKnown RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 OLFML1Q6UWY5 402 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 PEX5LQ8IYB4 626 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 EYA1Q99502 592 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 NLRP2Q9NX02 1062 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 IQSEC3Q9UPP2 1182 aaPredicted RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 SH3TC1Q8TE82 1336 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 CYP27B1O15528 508 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 SMIM24O75264 130 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 TMCC1O94876 653 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 MBD4O95243 580 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 BCRP11274 1271 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 USP11P51784 963 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 INHBCP55103 352 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 SH2D4BQ5SQS7 431 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 ZBTB8BQ8NAP8 495 aaPredicted RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 TBC1D31Q96DN5 1066 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 DHTKD1Q96HY7 919 aaPredicted RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 MTRQ99707 1265 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 NUP62CLQ9H1M0 184 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 DDX19AQ9NUU7 478 aaKnown RBP11.33□□□□□ -0.6
ATF3-206ENST00000366987 USP21Q9UK80 565 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 CROTQ9UKG9 612 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 TPCN1Q9ULQ1 816 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 C15orf41Q9Y2V0 281 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 DAAM1Q9Y4D1 1078 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 AFF2P51816 1311 aa11.33□□□□□ -0.6
ATF3-206ENST00000366987 BIN1O00499 593 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 MMEP08473 750 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 NLRP5P59047 1200 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 MCCD1P59942 119 aaPredicted RBP11.32□□□□□ -0.6
ATF3-206ENST00000366987 RIPK1Q13546 671 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
ATF3-206ENST00000366987 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
ATF3-206ENST00000366987 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 RSPH1Q8WYR4 309 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 ZFATQ9P243 1243 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 MAPK8IP1Q9UQF2 711 aa11.32□□□□□ -0.6
ATF3-206ENST00000366987 SMARCA5O60264 1052 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms