RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TPM1P09493 284 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 MYL5Q02045 173 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 NFXL1Q6ZNB6 911 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 MNS1Q8NEH6 495 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 DPF2Q92785 391 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 STRBPQ96SI9 672 aaKnown RBP16.81■□□□□ 0.28
PRKN-204ENST00000366896 POLD1P28340 1107 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 FCHSD1Q86WN1 690 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 WASF1Q92558 559 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 KIF13BQ9NQT8 1826 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 FANCGO15287 622 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 NPR1P16066 1061 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
PRKN-204ENST00000366896 RCAN1P53805 252 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 TMEM67Q5HYA8 995 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 SGIP1Q9BQI5 828 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.286e-17■■■■■ 149.9
PRKN-204ENST00000366896 TMX1Q9H3N1 280 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 SNAP23O00161 211 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 FGFR2P21802 821 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 CHRNDQ07001 517 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 TRIM29Q14134 588 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 PTPN21Q16825 1174 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
PRKN-204ENST00000366896 C2CD5Q86YS7 1000 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 TXLNBQ8N3L3 684 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 MINPP1Q9UNW1 487 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
PRKN-204ENST00000366896 PATL2C9JE40 543 aaKnown RBP16.79■□□□□ 0.28
PRKN-204ENST00000366896 MUM1L1Q5H9M0 696 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 LPIN2Q92539 896 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 MASTLQ96GX5 879 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 POLR3GO15318 223 aaPredicted RBP16.79■□□□□ 0.28
PRKN-204ENST00000366896 IFNAR1P17181 557 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 LONRF3Q496Y0 759 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 CARD6Q9BX69 1037 aa16.79■□□□□ 0.28
PRKN-204ENST00000366896 H0YIN7 160 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 FOXN1O15353 648 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 URI1O94763 535 aaPredicted RBP16.78■□□□□ 0.28
PRKN-204ENST00000366896 SEC31AO94979 1220 aaKnown RBP16.78■□□□□ 0.28
PRKN-204ENST00000366896 MBD4O95243 580 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 FMNL1O95466 1100 aaPredicted RBP16.78■□□□□ 0.28
PRKN-204ENST00000366896 GUCY1A2P33402 732 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
PRKN-204ENST00000366896 SPECC1Q5M775 1068 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 KRBA2Q6ZNG9 492 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 FOXP4Q8IVH2 680 aaPredicted RBP16.78■□□□□ 0.28
PRKN-204ENST00000366896 ZSWIM5Q9P217 1185 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 HOOK1Q9UJC3 728 aaKnown RBP16.78■□□□□ 0.28
PRKN-204ENST00000366896 BBOX1O75936 387 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 PTGER2P43116 358 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 GOLGA8FQ08AF8 430 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 GOLGA8DPQ0D2H9 430 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 MAGEB6Q8N7X4 407 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 NEK11Q8NG66 645 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 KRT23Q9C075 422 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 ARMT1Q9H993 441 aa16.78■□□□□ 0.28
PRKN-204ENST00000366896 FEZ2Q9UHY8 353 aaPredicted RBP16.78■□□□□ 0.28
PRKN-204ENST00000366896 CHRNA5P30532 468 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 UBASH3AP57075 661 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 NT5DC1Q5TFE4 455 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 OLFM4Q6UX06 510 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 SLC51AQ86UW1 340 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 VSTM4Q8IW00 320 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 IFNL3Q8IZI9 196 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 DLEC1Q9Y238 1755 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 TMEM232C9JQI7 657 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 IFIT3O14879 490 aaKnown RBP16.77■□□□□ 0.28
PRKN-204ENST00000366896 SASH3O75995 380 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 PDE4BQ07343 736 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 SSRP1Q08945 709 aaKnown RBP16.77■□□□□ 0.28
PRKN-204ENST00000366896 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 STYK1Q6J9G0 422 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 CC2D1AQ6P1N0 951 aaPredicted RBP16.77■□□□□ 0.28
PRKN-204ENST00000366896 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
PRKN-204ENST00000366896 SPATA5Q8NB90 893 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.28
PRKN-204ENST00000366896 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
PRKN-204ENST00000366896 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.27
PRKN-204ENST00000366896 PRKAB2O43741 272 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 SERPINC1P01008 464 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 GNAT2P19087 354 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 BMP6P22004 513 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 ALDH1B1P30837 517 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
PRKN-204ENST00000366896 GRIN1Q05586 938 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 STK11IPQ8N1F8 1099 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 ZNF579Q8NAF0 562 aaKnown RBP16.76■□□□□ 0.27
PRKN-204ENST00000366896 SMARCE1Q969G3 411 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms