RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 TRIM22Q8IYM9 498 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 ZC3H15Q8WU90 426 aaKnown RBP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 NUP62CLQ9H1M0 184 aa12.63□□□□□ -0.39
H3F3A-202ENST00000366814 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
H3F3A-202ENST00000366814 LAMB1P07942 1786 aa12.62□□□□□ -0.39
H3F3A-202ENST00000366814 BAG3O95817 575 aa12.62□□□□□ -0.39
H3F3A-202ENST00000366814 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
H3F3A-202ENST00000366814 PRDX5P30044 214 aa12.62□□□□□ -0.39
H3F3A-202ENST00000366814 SSRP1Q08945 709 aaKnown RBP12.62□□□□□ -0.39
H3F3A-202ENST00000366814 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
H3F3A-202ENST00000366814 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
H3F3A-202ENST00000366814 TRAF5O00463 557 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 USP17L8P0C7I0 530 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 ADD1P35611 737 aaKnown RBP12.61□□□□□ -0.39
H3F3A-202ENST00000366814 FMR1Q06787 632 aaKnown RBP eCLIP12.61□□□□□ -0.39
H3F3A-202ENST00000366814 MAP3K11Q16584 847 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 RTN1Q16799 776 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 UVSSAQ2YD98 709 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 STRIP1Q5VSL9 837 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 CD209Q9NNX6 404 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 INCENPQ9NQS7 918 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 MKRN1Q9UHC7 482 aaKnown RBP12.61□□□□□ -0.39
H3F3A-202ENST00000366814 PGAP2Q9UHJ9 254 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 RCOR1Q9UKL0 485 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 BAZ2AQ9UIF9 1905 aaKnown RBP12.61□□□□□ -0.39
H3F3A-202ENST00000366814 TRPM7Q96QT4 1865 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 CCDC192P0DO97 292 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 RXRAP19793 462 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 GTF2IP78347 998 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 PDE4BQ07343 736 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 KIF4BQ2VIQ3 1234 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 STK11IPQ8N1F8 1099 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 ZNF384Q8TF68 577 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
H3F3A-202ENST00000366814 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 MXD3Q9BW11 206 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
H3F3A-202ENST00000366814 TNMDQ9H2S6 317 aa12.61□□□□□ -0.39
H3F3A-202ENST00000366814 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 USP17L21D6R901 530 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
H3F3A-202ENST00000366814 EGFRP00533 1210 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 CALM1P0DP23 149 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 CALM2P0DP24 149 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 CALM3P0DP25 149 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 IFNAR1P17181 557 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 CDC27P30260 824 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 CEBPZQ03701 1054 aaKnown RBP12.6□□□□□ -0.39
H3F3A-202ENST00000366814 SF3A1Q15459 793 aaKnown RBP12.6□□□□□ -0.39
H3F3A-202ENST00000366814 SBK1Q52WX2 424 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 DACT2Q5SW24 774 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 CTR9Q6PD62 1173 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 CCDC73Q6ZRK6 1079 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 ZNF654Q8IZM8 581 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 OGFOD1Q8N543 542 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 USP28Q96RU2 1077 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 ZSCAN10Q96SZ4 725 aaPredicted RBP12.6□□□□□ -0.39
H3F3A-202ENST00000366814 GMLQ99445 158 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 ZKSCAN3Q9BRR0 538 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 DCP1AQ9NPI6 582 aaPredicted RBP12.6□□□□□ -0.39
H3F3A-202ENST00000366814 ABT1Q9ULW3 272 aaKnown RBP12.6□□□□□ -0.39
H3F3A-202ENST00000366814 TNKSO95271 1327 aa12.6□□□□□ -0.39
H3F3A-202ENST00000366814 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 ORC4O43929 436 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 FGRP09769 529 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 USP5P45974 858 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 ME1P48163 572 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 STK38Q15208 465 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 SAFBQ15424 915 aaKnown RBP eCLIP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 IFIT1BQ5T764 474 aaKnown RBP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 CATIPQ7Z7H3 387 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 RNF214Q8ND24 703 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 KCNG4Q8TDN1 519 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 TBC1D22AQ8WUA7 517 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 SLC26A6Q9BXS9 759 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 SENP2Q9HC62 589 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 DACT1Q9NYF0 836 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 MYO3BQ8WXR4 1341 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 YEATS4O95619 227 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 LIG1P18858 919 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 ZNF280AP59817 542 aaPredicted RBP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 NTRK3Q16288 839 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 MYSM1Q5VVJ2 828 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 PHKBQ93100 1093 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 PGBD1Q96JS3 809 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms