RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ARIH1Q9Y4X5 557 aaPredicted RBP12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 PDE4BQ07343 736 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 CASP8Q14790 479 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 NUDCD3Q8IVD9 361 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 ST13P4Q8IZP2 240 aaPredicted RBP12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 MTUS1Q9ULD2 1270 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 ABCC11Q96J66 1382 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 ETF1P62495 437 aaKnown RBP12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 ITIH3Q06033 890 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 ASXL1Q8IXJ9 1541 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 NBPF20Q3BBV1 942 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 KANK3Q6NY19 840 aa12.21□□□□□ -0.45
CDC42BPA-205ENST00000366769 DNAJC6O75061 913 aa12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 ANKRD7Q92527 254 aa12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 LRRC27Q9C0I9 530 aa12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 THEGQ9P2T0 379 aa12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 GNL1P36915 607 aaPredicted RBP12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 PNOCQ13519 176 aa12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 OLFML1Q6UWY5 402 aa12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.46
CDC42BPA-205ENST00000366769 PDE1AP54750 535 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 KIRREL3Q8IZU9 778 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 TTLL3Q9Y4R7 772 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 CDC25BP30305 580 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 RMDN2Q96LZ7 410 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 ANKRD50Q9ULJ7 1429 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 NOP9Q86U38 636 aaKnown RBP12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 CNTRLQ7Z7A1 2325 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 NINQ8N4C6 2090 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 FAM135AQ9P2D6 1515 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 NACA2Q9H009 215 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 SNUPNO95149 360 aaKnown RBP12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 KDM5AP29375 1690 aaKnown RBP12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 MSH2P43246 934 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 FAM47EQ6ZV65 393 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 TAB2Q9NYJ8 693 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 NLRP12P59046 1061 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 CASC4Q6P4E1 433 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 MSANTD4Q8NCY6 345 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 DCAF17Q5H9S7 520 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPA-205ENST00000366769 ENC1O14682 589 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 DAPK3O43293 454 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 NR1D1P20393 614 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 PPP4R4Q6NUP7 873 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 Q9H521 79 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 TMCO5AQ8N6Q1 288 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 EVI5O60447 810 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 CORO7P57737 925 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 SPAG1Q07617 926 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 SEPT2Q15019 361 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 PYM1Q9BRP8 204 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 MSH6P52701 1360 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 SKIP12755 728 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 HNRNPH1P31943 449 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 RCN2Q14257 317 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 RPAP2Q8IXW5 612 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 CCDC26Q8TAB7 109 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 SUN1O94901 812 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 INPP1P49441 399 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 PLIN2Q99541 437 aa12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-205ENST00000366769 TOGARAM2Q6ZUX3 1019 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 SPATA17Q96L03 361 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 TADA3O75528 432 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 DMPKQ09013 629 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 NAIPQ13075 1403 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 ZBBXA8MT70 800 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 CTCFP49711 727 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 KDM1AO60341 852 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 GUCY1A3Q02108 690 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 GUCY2DQ02846 1103 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 AFAP1L2Q8N4X5 818 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 TMED10P49755 219 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 GNAT1P11488 350 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 ATP6V1E1P36543 226 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 SLC44A4Q53GD3 710 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 MYH2Q9UKX2 1941 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 UHMK1Q8TAS1 419 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 C6orf50Q9HD87 102 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 BACH1O14867 736 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 ATP8B1O43520 1251 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 TMTC4Q5T4D3 741 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 SEL1L2Q5TEA6 688 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 SRGAP1Q7Z6B7 1085 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms