RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SEMA6BQ9H3T3 888 aa13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 DDX4Q9NQI0 724 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-202ENST00000366216 A0A1B0GUL7 405 aa13.47□□□□□ -0.25
CSNK1E-202ENST00000366216 HIP1O00291 1037 aa13.47□□□□□ -0.25
CSNK1E-202ENST00000366216 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-202ENST00000366216 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-202ENST00000366216 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
CSNK1E-202ENST00000366216 RAPGEFL1Q9UHV5 662 aa13.47□□□□□ -0.25
CSNK1E-202ENST00000366216 TCF20Q9UGU0 1960 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-202ENST00000366216 TNFRSF10AO00220 468 aa13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 MAP4K4O95819 1239 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 DSG3P32926 999 aa13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 PLA2G5P39877 138 aa13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 PROCA1Q8NCQ7 364 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 HAUS7Q99871 368 aa13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 BOLA2Q9H3K6 86 aa13.46□□□□□ -0.25
CSNK1E-202ENST00000366216 PLXNA1Q9UIW2 1896 aa13.46□□□□□ -0.26
CSNK1E-202ENST00000366216 ZNFX1Q9P2E3 1918 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 FAM196BA6NMK8 535 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 FOSL2P15408 326 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 CYP2B6P20813 491 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 TIMM10P62072 90 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 BECN1Q14457 450 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 RUFY2Q8WXA3 655 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 NEUROD6Q96NK8 337 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 SIPA1L1O43166 1804 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 FOCADQ5VW36 1801 aa13.45□□□□□ -0.26
CSNK1E-202ENST00000366216 GBF1Q92538 1859 aa13.44□□□□□ -0.26
CSNK1E-202ENST00000366216 SGSM2O43147 1006 aa13.44□□□□□ -0.26
CSNK1E-202ENST00000366216 XRCC5P13010 732 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-202ENST00000366216 TJAP1Q5JTD0 557 aa13.44□□□□□ -0.26
CSNK1E-202ENST00000366216 POTEEQ6S8J3 1075 aa13.44□□□□□ -0.26
CSNK1E-202ENST00000366216 IDI2Q9BXS1 227 aa13.44□□□□□ -0.26
CSNK1E-202ENST00000366216 TTYH1Q9H313 450 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-202ENST00000366216 REV3LO60673 3130 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 SMCHD1A6NHR9 2005 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 ENTPD3O75355 529 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 CACNB2Q08289 660 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 PABPC4Q13310 644 aaKnown RBP eCLIP13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 ATP2B3Q16720 1220 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 ZSCAN29Q8IWY8 852 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 TRMT44Q8IYL2 757 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 ZNF384Q8TF68 577 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 SOCS4Q8WXH5 440 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 XAGE2Q96GT9 111 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 ZNF512BQ96KM6 892 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 KIF2CQ99661 725 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 NUDT12Q9BQG2 462 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 ASCC2Q9H1I8 757 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 PRKAG2Q9UGJ0 569 aa13.43□□□□□ -0.26
CSNK1E-202ENST00000366216 GAKO14976 1311 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 RAD50Q92878 1312 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 LDHBP07195 334 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 CCND3P30281 292 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 SMAD3P84022 425 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 SHHQ15465 462 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 SNX21Q969T3 373 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 FAM122AQ96E09 287 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 IL17RAQ96F46 866 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 TXNRD2Q9NNW7 524 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 MORF4L1Q9UBU8 362 aa13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-202ENST00000366216 PHKA1P46020 1223 aa13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 HMGCS2P54868 508 aa13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 JAG1P78504 1218 aa13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 SPP2Q13103 211 aa13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 LPIN2Q92539 896 aa13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 FSD1Q9BTV5 496 aa13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 SENP6Q9GZR1 1112 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-202ENST00000366216 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 MCCP23508 829 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 ADORA1P30542 326 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 ANAPC15P60006 121 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 RABEP1Q15276 862 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 CCL14Q16627 93 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 SHROOM1Q2M3G4 852 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 C9orf50Q5SZB4 431 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 CWC27Q6UX04 472 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 KBTBD3Q8NAB2 608 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 ZNF280CQ8ND82 737 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 USP6NLQ92738 828 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 PAG1Q9NWQ8 432 aa13.4□□□□□ -0.26
CSNK1E-202ENST00000366216 SALL1Q9NSC2 1324 aa13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 SLC5A1P13866 664 aa13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 RHBDL3P58872 404 aa13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 KIAA1211Q6ZU35 1233 aa13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms