RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 LRRD1A4D1F6 860 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 HIP1O00291 1037 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 KIF3BO15066 747 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 CREB3O43889 395 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 OATP04181 439 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 ALADP13716 330 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 DEUP1Q05D60 604 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 SAFB2Q14151 953 aaKnown RBP eCLIP12.97□□□□□ -0.33
CNOT4-203ENST00000361528 CD302Q8IX05 232 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 C5orf60A6NFR6 353 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 SLC27A2O14975 620 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 JAK2O60674 1132 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 GLRX3O76003 335 aaKnown RBP12.96□□□□□ -0.33
CNOT4-203ENST00000361528 TNFRSF8P28908 595 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 ALDH3A1P30838 453 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 TMED1Q13445 227 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.33
CNOT4-203ENST00000361528 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.33
CNOT4-203ENST00000361528 SND1Q7KZF4 910 aaKnown RBP eCLIP12.96□□□□□ -0.33
CNOT4-203ENST00000361528 PPFIBP1Q86W92 1011 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 ATRIPQ8WXE1 791 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 ARL8AQ96BM9 186 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 INCENPQ9NQS7 918 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 G3BP2Q9UN86 482 aaKnown RBP12.96□□□□□ -0.33
CNOT4-203ENST00000361528 SYCP2Q9BX26 1530 aa12.96□□□□□ -0.33
CNOT4-203ENST00000361528 GPR75-ASB3A0A0A6YYF3 556 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 HMGB1P1B2RPK0 211 aaPredicted RBP12.96□□□□□ -0.34
CNOT4-203ENST00000361528 NR1D1P20393 614 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 CCND1P24385 295 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 KIF5BP33176 963 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 ITIH3Q06033 890 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 KRT32Q14532 448 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 LBRQ14739 615 aaKnown RBP12.96□□□□□ -0.34
CNOT4-203ENST00000361528 GNPTABQ3T906 1256 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 HDGFL1Q5TGJ6 251 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 PAPD7Q5XG87 772 aaKnown RBP12.96□□□□□ -0.34
CNOT4-203ENST00000361528 Q6ZUG5 572 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 TMTC1Q8IUR5 882 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 TRIM7Q9C029 511 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 WDR35Q9P2L0 1181 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 ASB3Q9Y575 518 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 SAR1BQ9Y6B6 198 aa12.96□□□□□ -0.34
CNOT4-203ENST00000361528 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 ZNF18P17022 549 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 CMA1P23946 247 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
CNOT4-203ENST00000361528 MRPS35P82673 323 aaKnown RBP12.95□□□□□ -0.34
CNOT4-203ENST00000361528 USP4Q13107 963 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 SEPT2Q15019 361 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 SGSM1Q2NKQ1 1148 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 ADGRF5Q8IZF2 1346 aa12.95□□□□□ -0.34
CNOT4-203ENST00000361528 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 E7EVH7 732 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 OPLAHO14841 1288 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 GUCY1A3Q02108 690 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 NR1I3Q14994 352 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 CNGA4Q8IV77 575 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 CACNA2D3Q8IZS8 1091 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 LINC00301Q8NCQ3 95 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 OSBPL1AQ9BXW6 950 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 FTOQ9C0B1 505 aaKnown RBP eCLIP12.94□□□□□ -0.34
CNOT4-203ENST00000361528 DNAAF2Q9NVR5 837 aaKnown RBP12.94□□□□□ -0.34
CNOT4-203ENST00000361528 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 ITSN1Q15811 1721 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 TET3O43151 1660 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 ATP1A2P50993 1020 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 ZBED6P86452 979 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 LMNB2Q03252 620 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 ZNF268Q14587 947 aaPredicted RBP12.94□□□□□ -0.34
CNOT4-203ENST00000361528 CMPK2Q5EBM0 449 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 MMGT1Q8N4V1 131 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 CCT6BQ92526 530 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 GDAP1L1Q96MZ0 367 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 MMS19Q96T76 1030 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 ZWILCHQ9H900 591 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 PHF24Q9UPV7 400 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 ATP7BP35670 1465 aa12.94□□□□□ -0.34
CNOT4-203ENST00000361528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.34
CNOT4-203ENST00000361528 GOLGA6L10A0A0M3HER8 536 aa12.93□□□□□ -0.34
CNOT4-203ENST00000361528 RBM47A0AV96 593 aaKnown RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 KIF4AO95239 1232 aa12.93□□□□□ -0.34
CNOT4-203ENST00000361528 PENKP01210 267 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 TFRCP02786 760 aaKnown RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 HIBCHQ6NVY1 386 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 ELOA2Q8IYF1 753 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 LZICQ8WZA0 190 aa12.93□□□□□ -0.34
CNOT4-203ENST00000361528 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-203ENST00000361528 SUN2Q9UH99 717 aa12.93□□□□□ -0.34
CNOT4-203ENST00000361528 GMEB1Q9Y692 573 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms