RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 GRPEL1Q9HAV7 217 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 HCSTQ9UBK5 93 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 TTF2Q9UNY4 1162 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ECM29Q5VYK3 1845 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 PDS5AQ29RF7 1337 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 TSPY2A6NKD2 308 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 LETM1O95202 739 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 VEGFAP15692 232 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 DMTNQ08495 405 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 SART3Q15020 963 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 SEC23AQ15436 765 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 RTN1Q16799 776 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 IFIT1BQ5T764 474 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 GIMAP6Q6P9H5 292 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 C15orf52Q6ZUT6 534 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 SGMS1Q86VZ5 419 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 FBXL16Q8N461 479 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 CEP120Q8N960 986 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ZNF830Q96NB3 372 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 RBSNQ9H1K0 784 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 CPVLQ9H3G5 476 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 RNF41Q9H4P4 317 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 DDX4Q9NQI0 724 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 MKRN1Q9UHC7 482 aaKnown RBP5.91□□□□□ -1.46
ATXN3-202ENST00000359366 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 ATP6V1DQ9Y5K8 247 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 CLIC4Q9Y696 253 aa5.91□□□□□ -1.46
ATXN3-202ENST00000359366 LRRC37AA6NMS7 1700 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 KIAA1551Q9HCM1 1747 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 A0A087WWV3 80 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 FAM196BA6NMK8 535 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 BAG3O95817 575 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 IARSP41252 1262 aaKnown RBP5.9□□□□□ -1.46
ATXN3-202ENST00000359366 BAG6P46379 1132 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 RHBDL3P58872 404 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 UBE2HP62256 183 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 TFAP4Q01664 338 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 TCP10Q12799 353 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 SHROOM1Q2M3G4 852 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-202ENST00000359366 C12orf60Q5U649 245 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 SYNE3Q6ZMZ3 975 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 ZFPM1Q8IX07 1006 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 TMEM87AQ8NBN3 555 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 FBXO18Q8NFZ0 1043 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 ERCC4Q92889 916 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-202ENST00000359366 SHISA4Q96DD7 197 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 NOL10Q9BSC4 688 aaKnown RBP5.9□□□□□ -1.46
ATXN3-202ENST00000359366 GTPBP4Q9BZE4 634 aaKnown RBP5.9□□□□□ -1.46
ATXN3-202ENST00000359366 MKNK2Q9HBH9 465 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 ATP8A2Q9NTI2 1148 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 ANAPC4Q9UJX5 808 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATXN3-202ENST00000359366 MAST2Q6P0Q8 1798 aa5.9□□□□□ -1.46
ATXN3-202ENST00000359366 FLT1P17948 1338 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 WDR19Q8NEZ3 1342 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 ADAMTS3O15072 1205 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 DHX16O60231 1041 aaKnown RBP5.9□□□□□ -1.47
ATXN3-202ENST00000359366 ECE2O60344 883 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 MBD3O95983 291 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 DPEP1P16444 411 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 ATP2B1P20020 1258 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 LIFRP42702 1097 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 RBM5P52756 815 aaKnown RBP eCLIP5.9□□□□□ -1.47
ATXN3-202ENST00000359366 NUBP1P53384 320 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 EIF6P56537 245 aaKnown RBP5.9□□□□□ -1.47
ATXN3-202ENST00000359366 GSTO1P78417 241 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 NFIAQ12857 509 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 NOM1Q5C9Z4 860 aaKnown RBP5.9□□□□□ -1.47
ATXN3-202ENST00000359366 PPP4R3BQ5MIZ7 849 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 KRT40Q6A162 431 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 NBPF11Q86T75 865 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 CKAP2LQ8IYA6 745 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 FANCBQ8NB91 859 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 COA1Q9GZY4 146 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 TMX4Q9H1E5 349 aaPredicted RBP5.9□□□□□ -1.47
ATXN3-202ENST00000359366 RRAGDQ9NQL2 400 aaPredicted RBP5.9□□□□□ -1.47
ATXN3-202ENST00000359366 IL17RBQ9NRM6 502 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 SCAF8Q9UPN6 1271 aaKnown RBP5.9□□□□□ -1.47
ATXN3-202ENST00000359366 MYH6P13533 1939 aa5.9□□□□□ -1.47
ATXN3-202ENST00000359366 LAMB1P07942 1786 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 GPR75-ASB3A0A0A6YYF3 556 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 GOLGA6L4A6NEF3 574 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 NR1I2O75469 434 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 GOLGA8HP0CJ92 632 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 MARCKSP29966 332 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 SSRP1Q08945 709 aaKnown RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 NR5A1Q13285 461 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 RCSD1Q6JBY9 416 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 IFNL1Q8IU54 200 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 NAV1Q8NEY1 1877 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 BICD2Q8TD16 824 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 OXER1Q8TDS5 423 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 PSMD1Q99460 953 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 GOLPH3LQ9H4A5 285 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 ZNF277Q9NRM2 450 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 USP40Q9NVE5 1235 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 ARPP21Q9UBL0 812 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 STX8Q9UNK0 236 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 MYH1P12882 1939 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 MYH15Q9Y2K3 1946 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms