RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 MTMR14Q8NCE2 650 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 FBXO18Q8NFZ0 1043 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 CCDC17Q96LX7 622 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 MXD3Q9BW11 206 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 RNF26Q9BY78 433 aaPredicted RBP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 SCAND2PQ9GZW5 306 aaPredicted RBP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 KAT14Q9H8E8 782 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 SENP2Q9HC62 589 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 FAM217BQ9NTX9 383 aaPredicted RBP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 SAP30BPQ9UHR5 308 aaKnown RBP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 CFAP45Q9UL16 551 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 COL2A1P02458 1487 aaPredicted RBP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 MYH1P12882 1939 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 SCN9AQ15858 1988 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 PLIN4Q96Q06 1357 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 PRPF40AO75400 957 aaKnown RBP15.68■□□□□ 0.1
CCDC197-201ENST00000359253 DEXIO95424 95 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 CDC27P30260 824 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 TROAPQ12815 778 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 TRIM29Q14134 588 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 BRAPQ7Z569 592 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 FOXP4Q8IVH2 680 aaPredicted RBP15.68■□□□□ 0.1
CCDC197-201ENST00000359253 CTCFLQ8NI51 663 aaPredicted RBP15.68■□□□□ 0.1
CCDC197-201ENST00000359253 MYOZ2Q9NPC6 264 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 TMOD2Q9NZR1 351 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 SERPINB13Q9UIV8 391 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 DDX49Q9Y6V7 483 aaKnown RBP15.68■□□□□ 0.1
CCDC197-201ENST00000359253 ELP1O95163 1332 aa15.68■□□□□ 0.1
CCDC197-201ENST00000359253 XBP1P17861 261 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 NOVP48745 357 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 C1QTNF8P60827 252 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
CCDC197-201ENST00000359253 RESTQ13127 1097 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 PICALMQ13492 652 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 CFAP100Q494V2 611 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 FKBP1CQ5VVH2 108 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 CRACR2BQ8N4Y2 399 aaPredicted RBP15.67■□□□□ 0.1
CCDC197-201ENST00000359253 NUP133Q8WUM0 1156 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 DYNLL2Q96FJ2 89 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 ZNF396Q96N95 335 aaPredicted RBP15.67■□□□□ 0.1
CCDC197-201ENST00000359253 LZTS2Q9BRK4 669 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 PI4KBQ9UBF8 816 aa15.67■□□□□ 0.1
CCDC197-201ENST00000359253 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
CCDC197-201ENST00000359253 HIRAP54198 1017 aaPredicted RBP15.66■□□□□ 0.1
CCDC197-201ENST00000359253 EAPPQ56P03 285 aaPredicted RBP15.66■□□□□ 0.1
CCDC197-201ENST00000359253 RCSD1Q6JBY9 416 aa15.66■□□□□ 0.1
CCDC197-201ENST00000359253 SAMD7Q7Z3H4 446 aa15.66■□□□□ 0.1
CCDC197-201ENST00000359253 FAM177A1Q8N128 213 aaPredicted RBP15.66■□□□□ 0.1
CCDC197-201ENST00000359253 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
CCDC197-201ENST00000359253 ECM29Q5VYK3 1845 aa15.66■□□□□ 0.1
CCDC197-201ENST00000359253 PRPF3O43395 683 aaKnown RBP15.65■□□□□ 0.1
CCDC197-201ENST00000359253 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 UBE2HP62256 183 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 GSE1Q14687 1217 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 KIF4BQ2VIQ3 1234 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 NBPF11Q86T75 865 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 METTL16Q86W50 562 aaKnown RBP15.65■□□□□ 0.1
CCDC197-201ENST00000359253 SLC26A6Q9BXS9 759 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 DDX4Q9NQI0 724 aaKnown RBP15.65■□□□□ 0.1
CCDC197-201ENST00000359253 IL17RBQ9NRM6 502 aa15.65■□□□□ 0.1
CCDC197-201ENST00000359253 ISY1Q9ULR0 285 aaKnown RBP15.65■□□□□ 0.1
CCDC197-201ENST00000359253 ATRNL1Q5VV63 1379 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 SPDYE2BA6NHP3 402 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 SPDYE6P0CI01 402 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 TOP1P11387 765 aaKnown RBP15.64■□□□□ 0.09
CCDC197-201ENST00000359253 RXRAP19793 462 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 DNM1Q05193 864 aaKnown RBP15.64■□□□□ 0.09
CCDC197-201ENST00000359253 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCDC197-201ENST00000359253 TBC1D10BQ4KMP7 808 aaPredicted RBP15.64■□□□□ 0.09
CCDC197-201ENST00000359253 RBM26Q5T8P6 1007 aaKnown RBP15.64■□□□□ 0.09
CCDC197-201ENST00000359253 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 PNMA1Q8ND90 353 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 SYAP1Q96A49 352 aaPredicted RBP15.64■□□□□ 0.09
CCDC197-201ENST00000359253 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
CCDC197-201ENST00000359253 MYL10Q9BUA6 226 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 PITPNM2Q9BZ72 1349 aa15.64■□□□□ 0.09
CCDC197-201ENST00000359253 WNT10BO00744 389 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 MYO1BO43795 1136 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
CCDC197-201ENST00000359253 EVX2Q03828 476 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 TMTC3Q6ZXV5 915 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 FERMT3Q86UX7 667 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 RAB11FIP4Q86YS3 637 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 CCDC144CPQ8IYA2 1237 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 TRPM4Q8TD43 1214 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 DCPSQ96C86 337 aaKnown RBP15.63■□□□□ 0.09
CCDC197-201ENST00000359253 TRIM34Q9BYJ4 488 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 FAM198AQ9UFP1 575 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 CNPY2Q9Y2B0 182 aa15.63■□□□□ 0.09
CCDC197-201ENST00000359253 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 POTEJP0CG39 1038 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 NFIAQ12857 509 aa15.62■□□□□ 0.09
CCDC197-201ENST00000359253 GRM4Q14833 912 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms