RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 TYW1BQ6NUM6 668 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 KLHL7Q8IXQ5 586 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 CNBD1Q8NA66 436 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 IFIH1Q9BYX4 1025 aaKnown RBP15.3■□□□□ 0.04
VCP-201ENST00000358901 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 RCOR1Q9UKL0 485 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 SP4Q02446 784 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 CCDC6Q16204 474 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 RRAGAQ7L523 313 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 IFT20Q8IY31 132 aa15.3■□□□□ 0.04
VCP-201ENST00000358901 TTC37Q6PGP7 1564 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 SPOPO43791 374 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 TNFAIP3P21580 790 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 BCAMP50895 628 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 ASIC2Q16515 512 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 CCDC51Q96ER9 411 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 TTC14Q96N46 770 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 PHKA1P46020 1223 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 PTPN21Q16825 1174 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 C6orf163Q5TEZ5 329 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 REXO1Q8N1G1 1221 aaKnown RBP15.29■□□□□ 0.04
VCP-201ENST00000358901 ZBTB38Q8NAP3 1195 aaPredicted RBP15.29■□□□□ 0.04
VCP-201ENST00000358901 PI4K2BQ8TCG2 481 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 PLEKHA4Q9H4M7 779 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 KCNJ18B7U540 433 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 GYG1P46976 350 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 KCNJ12Q14500 433 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 NAP1L4Q99733 375 aaKnown RBP15.29■□□□□ 0.04
VCP-201ENST00000358901 SAMD15Q9P1V8 674 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 HDAC9Q9UKV0 1011 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 MAST3O60307 1309 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 PRR36Q9H6K5 1346 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
VCP-201ENST00000358901 EFCAB8A8MWE9 144 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 NECTIN1Q15223 517 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 CALCRLQ16602 461 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 APOA5Q6Q788 366 aa15.29■□□□□ 0.04
VCP-201ENST00000358901 SASH1O94885 1247 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 BRD3Q15059 726 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 TRIML1Q8N9V2 468 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 TGFBRAP1Q8WUH2 860 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 YEATS2Q9ULM3 1422 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 PCCAP05165 728 aaPredicted RBP15.28■□□□□ 0.04
VCP-201ENST00000358901 ADCY7P51828 1080 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 ERBB4Q15303 1308 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 VIMP08670 466 aaKnown RBP15.28■□□□□ 0.04
VCP-201ENST00000358901 MORC3Q14149 939 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 SPATA1Q5VX52 437 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 GREM2Q9H772 168 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 CARMIL3Q8ND23 1372 aa15.28■□□□□ 0.04
VCP-201ENST00000358901 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.04
VCP-201ENST00000358901 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 ZSCAN26Q16670 478 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 TRAPPC3LQ5T215 181 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 ZSCAN10Q96SZ4 725 aaPredicted RBP15.27■□□□□ 0.04
VCP-201ENST00000358901 PDE8BO95263 885 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 RPS8P62241 208 aaKnown RBP15.27■□□□□ 0.04
VCP-201ENST00000358901 PTGDRQ13258 359 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 SEL1L2Q5TEA6 688 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 B4GALNT4Q76KP1 1039 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 LINC00301Q8NCQ3 95 aa15.27■□□□□ 0.04
VCP-201ENST00000358901 SMCO2A6NFE2 343 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 SLC1A4P43007 532 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 INF2Q27J81 1249 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 CFAP221Q4G0U5 840 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 BLIDQ8IZY5 108 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 POLR3EQ9NVU0 708 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 SERPINA10Q9UK55 444 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 SAMD9LQ8IVG5 1584 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 STX10O60499 249 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 UBE3CQ15386 1083 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 NBPF14Q5TI25 921 aa15.27■□□□□ 0.03
VCP-201ENST00000358901 NAP1L3Q99457 506 aaPredicted RBP15.27■□□□□ 0.03
VCP-201ENST00000358901 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 INPP5BP32019 993 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 MXRA7P84157 204 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 PI16Q6UXB8 463 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 FMNL3Q8IVF7 1028 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 LRRC45Q96CN5 670 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 ACTN4O43707 911 aaKnown RBP15.26■□□□□ 0.03
VCP-201ENST00000358901 STAMBPO95630 424 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 PPFIA1Q13136 1202 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 PAK2Q13177 524 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 RPS6KA1Q15418 735 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 PPP1R13BQ96KQ4 1090 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 FERMT1Q9BQL6 677 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
VCP-201ENST00000358901 BACH1O14867 736 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 PTPN12Q05209 780 aaKnown RBP15.26■□□□□ 0.03
VCP-201ENST00000358901 POLA2Q14181 598 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 WHAMMP3Q1A5X7 153 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms