RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TRIM29Q14134 588 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 C15orf52Q6ZUT6 534 aaKnown RBP16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 MRFAP1L1Q96HT8 127 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 L3MBTL3Q96JM7 780 aaPredicted RBP16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 RIOK1Q9BRS2 568 aaKnown RBP16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 ANAPC4Q9UJX5 808 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 ERICH2A1L162 156 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 PSMD14O00487 310 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 SEMA3EO15041 775 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 IFNAR1P17181 557 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 MAST2Q6P0Q8 1798 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 FBXO33Q7Z6M2 555 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 WASF1Q92558 559 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 SLC26A6Q9BXS9 759 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 COA1Q9GZY4 146 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 PYCARDQ9ULZ3 195 aa16.49■□□□□ 0.23
NIPAL3-203ENST00000358028 NEMFO60524 1076 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 PTGS1P23219 599 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 SCNN1DP51172 638 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 NDUFA8P51970 172 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 CHAF1AQ13111 956 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 GNL2Q13823 731 aaKnown RBP16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 CEP57L1Q8IYX8 460 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 SMC1BQ8NDV3 1235 aa16.48■□□□□ 0.23
NIPAL3-203ENST00000358028 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 RCAN1P53805 252 aa16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 RTN1Q16799 776 aa16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 CCDC186Q7Z3E2 898 aa16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 STK11IPQ8N1F8 1099 aa16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 ADAMTSL1Q8N6G6 1762 aa16.47■□□□□ 0.23
NIPAL3-203ENST00000358028 MINDY4BA8MYZ0 360 aa16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 U2AF2P26368 475 aaKnown RBP eCLIP16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 GMPSP49915 693 aaPredicted RBP16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 DYNLL1P63167 89 aaKnown RBP16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 TNIP1Q15025 636 aa16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 AXDND1Q5T1B0 1012 aaPredicted RBP16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 ZNF804AQ7Z570 1209 aa16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 CD209Q9NNX6 404 aa16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 BAZ2AQ9UIF9 1905 aaKnown RBP16.46■□□□□ 0.23
NIPAL3-203ENST00000358028 CMA1P23946 247 aa16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 ESR2Q92731 530 aa16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 BPIFA3Q9BQP9 254 aa16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 SDF4Q9BRK5 362 aa16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.22
NIPAL3-203ENST00000358028 PCNTO95613 3336 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 BECN2A8MW95 431 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 PPP6R2O75170 966 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 PTPAQ15257 358 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 TRIM22Q8IYM9 498 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 ZNF654Q8IZM8 581 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 LAMB1P07942 1786 aa16.45■□□□□ 0.22
NIPAL3-203ENST00000358028 MROH7-TTC4A0A0A0MT08 1334 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 USP17L3A6NCW0 530 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 USP17L4A6NCW7 530 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 UBE2Q2LH0YL09 131 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 WDHD1O75717 1129 aaPredicted RBP16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 IL1R1P14778 569 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 PFKFB1P16118 471 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 HIBADHP31937 336 aaKnown RBP16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 SEC23AQ15436 765 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 USP17L1Q7RTZ2 530 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 NBPF11Q86T75 865 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 FBXW7Q969H0 707 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 MAP3K14Q99558 947 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 MXD3Q9BW11 206 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 HACL1Q9UJ83 578 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 TNKSO95271 1327 aa16.44■□□□□ 0.22
NIPAL3-203ENST00000358028 IQCA1LA6NCM1 817 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 VIL1P09327 827 aaKnown RBP16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 EPS15P42566 896 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 NSUN4Q96CB9 384 aaKnown RBP16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 TAF1DQ9H5J8 278 aaPredicted RBP16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 FAM13BQ9NYF5 915 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 JAG2Q9Y219 1238 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 ZNF202O95125 648 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 DEXIO95424 95 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 MMP1P03956 469 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 MARCKSP29966 332 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms