RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 EIF4G2P78344 907 aaKnown RBP eCLIP9.84□□□□□ -0.83
RFX4-202ENST00000357881 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 PMM1Q92871 262 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 CDCA7LQ96GN5 454 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 BRD8Q9H0E9 1235 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 ZNF510Q9Y2H8 683 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 CYP27B1O15528 508 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 RNF8O76064 485 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 VIL1P09327 827 aaKnown RBP9.84□□□□□ -0.83
RFX4-202ENST00000357881 DPEP1P16444 411 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 IL4RP24394 825 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 HDAC4P56524 1084 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 MYBPC3Q14896 1274 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 VPS53Q5VIR6 699 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 GALNT17Q6IS24 598 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 TLDC1Q6P9B6 456 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 LDHDQ86WU2 507 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 AMOTL1Q8IY63 956 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 CEP57L1Q8IYX8 460 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 DDX54Q8TDD1 881 aaKnown RBP9.84□□□□□ -0.83
RFX4-202ENST00000357881 CUL5Q93034 780 aa9.84□□□□□ -0.83
RFX4-202ENST00000357881 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.84□□□□□ -0.83
RFX4-202ENST00000357881 IBSPP21815 317 aaPredicted RBP9.83□□□□□ -0.84
RFX4-202ENST00000357881 DZIP1Q86YF9 867 aaKnown RBP9.83□□□□□ -0.84
RFX4-202ENST00000357881 MAB21L3Q8N8X9 362 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 SMYD1Q8NB12 490 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 BICD2Q8TD16 824 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 CAPS2Q9BXY5 557 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 RSPH9Q9H1X1 276 aaPredicted RBP9.83□□□□□ -0.84
RFX4-202ENST00000357881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.84
RFX4-202ENST00000357881 TMEM88BA6NKF7 163 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 TRIM64CA6NLI5 447 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 TBC1D8O95759 1140 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 CASTP20810 708 aaKnown RBP9.83□□□□□ -0.84
RFX4-202ENST00000357881 KCNA3P22001 575 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 ECE1P42892 770 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 INHBCP55103 352 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 HTRA3P83110 453 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 ROR2Q01974 943 aaKnown RBP9.83□□□□□ -0.84
RFX4-202ENST00000357881 PDE4BQ07343 736 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.84
RFX4-202ENST00000357881 KRT72Q14CN4 511 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 C1orf131Q8NDD1 294 aaKnown RBP9.83□□□□□ -0.84
RFX4-202ENST00000357881 ARHGAP45Q92619 1136 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 TMX3Q96JJ7 454 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 SLC39A3Q9BRY0 314 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 PLEKHA4Q9H4M7 779 aa9.83□□□□□ -0.84
RFX4-202ENST00000357881 NSFL1CQ9UNZ2 370 aaKnown RBP9.83□□□□□ -0.84
RFX4-202ENST00000357881 TPD52L1Q16890 204 aaPredicted RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 TSR1Q2NL82 804 aaKnown RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.82□□□□□ -0.84
RFX4-202ENST00000357881 CCDC73Q6ZRK6 1079 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 TTLL7Q6ZT98 887 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 C14orf80Q86SX3 495 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 SYCP3Q8IZU3 236 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 VTI1AQ96AJ9 217 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 SYTL4Q96C24 671 aaPredicted RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 ALS2CR12Q96Q35 445 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 SPOCK3Q9BQ16 436 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.82□□□□□ -0.84
RFX4-202ENST00000357881 CABP2Q9NPB3 220 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 WDR37Q9Y2I8 494 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 LTBP1Q14766 1721 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 SEC31AO94979 1220 aaKnown RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 TATP17735 454 aaPredicted RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 GCLCP48506 637 aaPredicted RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 PAPOLAP51003 745 aaKnown RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 MAP3K9P80192 1104 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 CCDC92Q53HC0 331 aaPredicted RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 RUFY1Q96T51 708 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 INCENPQ9NQS7 918 aa9.82□□□□□ -0.84
RFX4-202ENST00000357881 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.82□□□□□ -0.84
RFX4-202ENST00000357881 ZNF132P52740 706 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 G3BP1Q13283 466 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFX4-202ENST00000357881 BTG3Q14201 252 aaPredicted RBP9.81□□□□□ -0.84
RFX4-202ENST00000357881 CLPPQ16740 277 aaPredicted RBP9.81□□□□□ -0.84
RFX4-202ENST00000357881 ARHGAP29Q52LW3 1261 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 ANKK1Q8NFD2 765 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 HPS3Q969F9 1004 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 OSBPL9Q96SU4 736 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 GORASP1Q9BQQ3 440 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 MIS18AQ9NYP9 233 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 WDHD1O75717 1129 aaPredicted RBP9.81□□□□□ -0.84
RFX4-202ENST00000357881 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 GJC2Q5T442 439 aaPredicted RBP9.81□□□□□ -0.84
RFX4-202ENST00000357881 CAPRIN2Q6IMN6 1127 aaKnown RBP9.81□□□□□ -0.84
RFX4-202ENST00000357881 FILIP1Q7Z7B0 1213 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 PEX5LQ8IYB4 626 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFX4-202ENST00000357881 VPS37AQ8NEZ2 397 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 L3MBTL3Q96JM7 780 aaPredicted RBP9.81□□□□□ -0.84
RFX4-202ENST00000357881 OSBPL10Q9BXB5 764 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 HOXC10Q9NYD6 342 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 KLHL42Q9P2K6 505 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 DDX20Q9UHI6 824 aaKnown RBP9.81□□□□□ -0.84
RFX4-202ENST00000357881 DNAI1Q9UI46 699 aa9.81□□□□□ -0.84
RFX4-202ENST00000357881 ADAMTS7Q9UKP4 1686 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms