RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 MAPK4P31152 587 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP14P54578 494 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 EVX2Q03828 476 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 RAB3GAP1Q15042 981 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 ZYXQ15942 572 aaKnown RBP12.41□□□□□ -0.42
LINC01560-201ENST00000357412 ABCB5Q2M3G0 1257 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 EDC3Q96F86 508 aaKnown RBP12.41□□□□□ -0.42
LINC01560-201ENST00000357412 PAGR1Q9BTK6 254 aa12.41□□□□□ -0.42
LINC01560-201ENST00000357412 HMX1Q9NP08 348 aaPredicted RBP12.41□□□□□ -0.42
LINC01560-201ENST00000357412 ZNF532Q9HCE3 1301 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 TRIOBPQ9H2D6 2365 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 EVI5O60447 810 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 RAB11FIP3O75154 756 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 HMMRO75330 724 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 POLR3DP05423 398 aaPredicted RBP12.4□□□□□ -0.42
LINC01560-201ENST00000357412 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
LINC01560-201ENST00000357412 VCAM1P19320 739 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 MORN1Q5T089 497 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 CATSPERGQ6ZRH7 1159 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 NECAB2Q7Z6G3 386 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 SDR42E1Q8WUS8 393 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
LINC01560-201ENST00000357412 FEZ1Q99689 392 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 CRNKL1Q9BZJ0 848 aaKnown RBP12.4□□□□□ -0.42
LINC01560-201ENST00000357412 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 DCP1AQ9NPI6 582 aaPredicted RBP12.4□□□□□ -0.42
LINC01560-201ENST00000357412 MCM9Q9NXL9 1143 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 OGDHLQ9ULD0 1010 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 RABGAP1Q9Y3P9 1069 aa12.4□□□□□ -0.42
LINC01560-201ENST00000357412 A0A1W2PRG0 241 aa12.39□□□□□ -0.43
LINC01560-201ENST00000357412 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
LINC01560-201ENST00000357412 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
LINC01560-201ENST00000357412 SEPT2Q15019 361 aa12.39□□□□□ -0.43
LINC01560-201ENST00000357412 CCL14Q16627 93 aa12.39□□□□□ -0.43
LINC01560-201ENST00000357412 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
LINC01560-201ENST00000357412 LBX2Q6XYB7 198 aa12.39□□□□□ -0.43
LINC01560-201ENST00000357412 LCORLQ8N3X6 602 aa12.39□□□□□ -0.43
LINC01560-201ENST00000357412 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
LINC01560-201ENST00000357412 CYP2D6P10635 497 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
LINC01560-201ENST00000357412 ATP5JP18859 108 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 RGS2P41220 211 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 CACNB2Q08289 660 aaPredicted RBP12.38□□□□□ -0.43
LINC01560-201ENST00000357412 CCAR1Q8IX12 1150 aaKnown RBP12.38□□□□□ -0.43
LINC01560-201ENST00000357412 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
LINC01560-201ENST00000357412 SLC44A5Q8NCS7 719 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 APBA2Q99767 749 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 BOLA2Q9H3K6 86 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
LINC01560-201ENST00000357412 ARMT1Q9H993 441 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 BTBD7Q9P203 1132 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 MYH2Q9UKX2 1941 aa12.38□□□□□ -0.43
LINC01560-201ENST00000357412 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
LINC01560-201ENST00000357412 PRKAB2O43741 272 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 CHGBP05060 677 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 ADD2P35612 726 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 CCNA1P78396 465 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 LHX8Q68G74 356 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 BCL11AQ9H165 835 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 C11orf49Q9H6J7 331 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 PAG1Q9NWQ8 432 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 RCAN3Q9UKA8 241 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 SZT2Q5T011 3432 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
LINC01560-201ENST00000357412 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 MPHOSPH10O00566 681 aaKnown RBP12.36□□□□□ -0.43
LINC01560-201ENST00000357412 PTPREP23469 700 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 CCND3P30281 292 aaPredicted RBP12.36□□□□□ -0.43
LINC01560-201ENST00000357412 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 HAUS7Q99871 368 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
LINC01560-201ENST00000357412 FLRT1Q9NZU1 646 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 STAP2Q9UGK3 403 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 DOCK2Q92608 1830 aa12.36□□□□□ -0.43
LINC01560-201ENST00000357412 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 SLC15A5A6NIM6 579 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
LINC01560-201ENST00000357412 MBD4O95243 580 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 HOXC6P09630 235 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 COL6A1P12109 1028 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 AKR1B1P15121 316 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 GRB14Q14449 540 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 COG2Q14746 738 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 UBE3CQ15386 1083 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 GDF15Q99988 308 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 ATP8A2Q9NTI2 1148 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 SWAP70Q9UH65 585 aa12.35□□□□□ -0.43
LINC01560-201ENST00000357412 ZMYND8Q9ULU4 1186 aaPredicted RBP12.35□□□□□ -0.43
LINC01560-201ENST00000357412 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
LINC01560-201ENST00000357412 DOCK1Q14185 1865 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms