RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CCDC197Q8NCU1 140 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 MEIS3Q99687 375 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 VPS37BQ9H9H4 285 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 KIF14Q15058 1648 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 ABCC5O15440 1437 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 SOS1Q07889 1333 aaPredicted RBP14.18□□□□□ -0.14
SMC4-202ENST00000357388 BCRP11274 1271 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 DACT3Q96B18 629 aaPredicted RBP14.18□□□□□ -0.14
SMC4-202ENST00000357388 AMFRQ9UKV5 643 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 RIMBP2O15034 1052 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 BAG2O95816 211 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 VWA3AA6NCI4 1184 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 CUL4BQ13620 913 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 TSC1Q92574 1164 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 KLHL30Q0D2K2 578 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 CCDC13Q8IYE1 715 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 ANKRD42Q8N9B4 389 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.18□□□□□ -0.141e-8■■■■■ 54.3
SMC4-202ENST00000357388 GJA3Q9Y6H8 435 aa14.18□□□□□ -0.14
SMC4-202ENST00000357388 ANXA1P04083 346 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 PARP10Q53GL7 1025 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 RABGGTAQ92696 567 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 IFIH1Q9BYX4 1025 aaKnown RBP14.17□□□□□ -0.14
SMC4-202ENST00000357388 PPP2R5BQ15173 497 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 CXorf38Q8TB03 319 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 RIC8AQ9NPQ8 531 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 SCINQ9Y6U3 715 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 TBC1D8O95759 1140 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 PHEXP78562 749 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 STRN3Q13033 797 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 LONRF2Q1L5Z9 754 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 CNBD1Q8NA66 436 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 CCHCR1Q8TD31 782 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 DCAF5Q96JK2 942 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.17□□□□□ -0.14
SMC4-202ENST00000357388 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
SMC4-202ENST00000357388 CLTAP09496 248 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 SLC12A2P55011 1212 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 HACE1Q8IYU2 909 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 MAGEB6Q8N7X4 407 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 MRRFQ96E11 262 aaKnown RBP14.17□□□□□ -0.14
SMC4-202ENST00000357388 AFG3L2Q9Y4W6 797 aa14.17□□□□□ -0.14
SMC4-202ENST00000357388 M0QZ92 97 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 NOP56O00567 594 aaKnown RBP14.16□□□□□ -0.14
SMC4-202ENST00000357388 TTC4O95801 387 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 TEX11Q8IYF3 940 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 CCDC89Q8N998 374 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 PLCH2O75038 1416 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 SP4Q02446 784 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 RPS6KA2Q15349 733 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 NFE2L3Q9Y4A8 694 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 HGSO14964 777 aaPredicted RBP14.16□□□□□ -0.14
SMC4-202ENST00000357388 TRIM42Q8IWZ5 723 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 HAUS4Q9H6D7 363 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 PLEKHM2Q8IWE5 1019 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 NSMCE1Q8WV22 266 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 SLF1Q9BQI6 1058 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 TRIM6Q9C030 488 aaPredicted RBP14.16□□□□□ -0.14
SMC4-202ENST00000357388 CCDC68Q9H2F9 335 aa14.16□□□□□ -0.14
SMC4-202ENST00000357388 SKIP12755 728 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 MTX1Q13505 466 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 RNASE9P60153 205 aaKnown RBP14.15□□□□□ -0.14
SMC4-202ENST00000357388 ETF1P62495 437 aaKnown RBP14.15□□□□□ -0.14
SMC4-202ENST00000357388 SLC39A6Q13433 755 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 FAM83GA6ND36 823 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 ZNF202O95125 648 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 POSTNQ15063 836 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 AKNAD1Q5T1N1 836 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 ZC4H2Q9NQZ6 224 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 BAG5Q9UL15 447 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 PALM2Q8IXS6 379 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 NOC2LQ9Y3T9 749 aaKnown RBP14.15□□□□□ -0.14
SMC4-202ENST00000357388 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.14
SMC4-202ENST00000357388 DAPK3O43293 454 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 MRFAP1L1Q96HT8 127 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 LRGUKQ96M69 825 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 KRT12Q99456 494 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 SART1O43290 800 aaKnown RBP14.14□□□□□ -0.15
SMC4-202ENST00000357388 DNM2P50570 870 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 CEP85Q6P2H3 762 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 MGARPQ8TDB4 240 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 SPZ1Q9BXG8 430 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 NACA2Q9H009 215 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 SEPT10Q9P0V9 454 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 NESP48681 1621 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
SMC4-202ENST00000357388 IL9RQ01113 521 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 TCIRG1Q13488 830 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 LRRC8CQ8TDW0 803 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 LMBRD1Q9NUN5 540 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 SLC5A4Q9NY91 659 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 ZBED4O75132 1171 aa14.14□□□□□ -0.15
SMC4-202ENST00000357388 PDZD8Q8NEN9 1154 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms