RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 IQCA1Q86XH1 822 aa28.58■■■□□ 2.17
HDGF-201ENST00000357325 DHX58Q96C10 678 aa28.58■■■□□ 2.17
HDGF-201ENST00000357325 KCND1Q9NSA2 647 aa28.58■■■□□ 2.17
HDGF-201ENST00000357325 ZNF215Q9UL58 517 aaPredicted RBP28.58■■■□□ 2.17
HDGF-201ENST00000357325 HIBADHP31937 336 aaKnown RBP28.57■■■□□ 2.16
HDGF-201ENST00000357325 ZNF174Q15697 407 aa28.57■■■□□ 2.16
HDGF-201ENST00000357325 KRT2P35908 639 aa28.57■■■□□ 2.16
HDGF-201ENST00000357325 MORC3Q14149 939 aa28.56■■■□□ 2.16
HDGF-201ENST00000357325 NT5DC1Q5TFE4 455 aa28.56■■■□□ 2.16
HDGF-201ENST00000357325 VSTM4Q8IW00 320 aa28.56■■■□□ 2.16
HDGF-201ENST00000357325 ZNF579Q8NAF0 562 aaKnown RBP28.56■■■□□ 2.16
HDGF-201ENST00000357325 NLRP3Q96P20 1036 aa28.56■■■□□ 2.16
HDGF-201ENST00000357325 SETDB2Q96T68 719 aa28.56■■■□□ 2.16
HDGF-201ENST00000357325 NFE2L3Q9Y4A8 694 aa28.56■■■□□ 2.16
HDGF-201ENST00000357325 TRIM75PA6NK02 468 aa28.55■■■□□ 2.16
HDGF-201ENST00000357325 SPDYE4A6NLX3 237 aa28.55■■■□□ 2.16
HDGF-201ENST00000357325 GNPATO15228 680 aa28.55■■■□□ 2.16
HDGF-201ENST00000357325 AFMP43652 599 aa28.55■■■□□ 2.16
HDGF-201ENST00000357325 TMTC3Q6ZXV5 915 aa28.55■■■□□ 2.16
HDGF-201ENST00000357325 SMARCE1Q969G3 411 aa28.55■■■□□ 2.16
HDGF-201ENST00000357325 SAMSN1Q9NSI8 373 aaKnown RBP28.55■■■□□ 2.16
HDGF-201ENST00000357325 CNTNAP5Q8WYK1 1306 aa28.55■■■□□ 2.16
HDGF-201ENST00000357325 CBX1P83916 185 aa28.54■■■□□ 2.16
HDGF-201ENST00000357325 TNFRSF25Q93038 417 aa28.54■■■□□ 2.16
HDGF-201ENST00000357325 NARFQ9UHQ1 456 aa28.54■■■□□ 2.16
HDGF-201ENST00000357325 CNTNAP4Q9C0A0 1308 aa28.54■■■□□ 2.16
HDGF-201ENST00000357325 TM4SF1P30408 202 aa28.54■■■□□ 2.16
HDGF-201ENST00000357325 SYT10Q6XYQ8 523 aa28.54■■■□□ 2.16
HDGF-201ENST00000357325 USP17L8P0C7I0 530 aa28.53■■■□□ 2.16
HDGF-201ENST00000357325 STAMQ92783 540 aa28.53■■■□□ 2.16
HDGF-201ENST00000357325 SYMPKQ92797 1274 aaKnown RBP28.53■■■□□ 2.16
HDGF-201ENST00000357325 C8orf37Q96NL8 207 aa28.53■■■□□ 2.16
HDGF-201ENST00000357325 ELOA2Q8IYF1 753 aaPredicted RBP28.53■■■□□ 2.16
HDGF-201ENST00000357325 CEP131Q9UPN4 1083 aa28.53■■■□□ 2.16
HDGF-201ENST00000357325 LRRN4CLQ8ND94 238 aa28.52■■■□□ 2.16
HDGF-201ENST00000357325 PRDM10Q9NQV6 1147 aa28.52■■■□□ 2.16
HDGF-201ENST00000357325 GRIK5Q16478 980 aa28.52■■■□□ 2.16
HDGF-201ENST00000357325 GPR101Q96P66 508 aaPredicted RBP28.52■■■□□ 2.16
HDGF-201ENST00000357325 TOP1P11387 765 aaKnown RBP28.51■■■□□ 2.15
HDGF-201ENST00000357325 ZNF18P17022 549 aa28.51■■■□□ 2.15
HDGF-201ENST00000357325 XBP1P17861 261 aa28.51■■■□□ 2.15
HDGF-201ENST00000357325 PPP2R5BQ15173 497 aa28.51■■■□□ 2.15
HDGF-201ENST00000357325 SMYD4Q8IYR2 804 aaPredicted RBP28.51■■■□□ 2.15
HDGF-201ENST00000357325 KIF18AQ8NI77 898 aa28.51■■■□□ 2.15
HDGF-201ENST00000357325 CBFA2T2O43439 604 aa28.51■■■□□ 2.15
HDGF-201ENST00000357325 CD44P16070 742 aaKnown RBP28.51■■■□□ 2.15
HDGF-201ENST00000357325 SPATA20Q8TB22 786 aa28.51■■■□□ 2.15
HDGF-201ENST00000357325 CRNKL1Q9BZJ0 848 aaKnown RBP28.51■■■□□ 2.15
HDGF-201ENST00000357325 TMX1Q9H3N1 280 aa28.51■■■□□ 2.15
HDGF-201ENST00000357325 RBM28Q9NW13 759 aaKnown RBP28.51■■■□□ 2.15
HDGF-201ENST00000357325 HOOK1Q9UJC3 728 aaKnown RBP28.51■■■□□ 2.15
HDGF-201ENST00000357325 FANCGO15287 622 aa28.5■■■□□ 2.15
HDGF-201ENST00000357325 RPS6KA4O75676 772 aa28.5■■■□□ 2.15
HDGF-201ENST00000357325 RCSD1Q6JBY9 416 aa28.5■■■□□ 2.15
HDGF-201ENST00000357325 PSDA5PKW4 1024 aaPredicted RBP28.5■■■□□ 2.15
HDGF-201ENST00000357325 COBLO75128 1261 aa28.5■■■□□ 2.15
HDGF-201ENST00000357325 TMEM139Q8IV31 216 aa28.5■■■□□ 2.15
HDGF-201ENST00000357325 DYNLL2Q96FJ2 89 aa28.5■■■□□ 2.15
HDGF-201ENST00000357325 MCM9Q9NXL9 1143 aa28.5■■■□□ 2.15
HDGF-201ENST00000357325 VWA3AA6NCI4 1184 aa28.49■■■□□ 2.15
HDGF-201ENST00000357325 SEMA3EO15041 775 aa28.49■■■□□ 2.15
HDGF-201ENST00000357325 ORC4O43929 436 aa28.49■■■□□ 2.15
HDGF-201ENST00000357325 ZPR1O75312 459 aa28.49■■■□□ 2.15
HDGF-201ENST00000357325 DDAH1O94760 285 aa28.49■■■□□ 2.15
HDGF-201ENST00000357325 STX17P56962 302 aa28.49■■■□□ 2.15
HDGF-201ENST00000357325 ARHGEF1Q92888 912 aaKnown RBP28.49■■■□□ 2.15
HDGF-201ENST00000357325 DLEC1Q9Y238 1755 aa28.49■■■□□ 2.15
HDGF-201ENST00000357325 PTGDRQ13258 359 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 KLHL10Q6JEL2 608 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 PIK3AP1Q6ZUJ8 805 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 MLKLQ8NB16 471 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 PAGE5Q96GU1 130 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 IRS2Q9Y4H2 1338 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 TSPY2A6NKD2 308 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 TTC38Q5R3I4 469 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 CTCFLQ8NI51 663 aaPredicted RBP28.48■■■□□ 2.15
HDGF-201ENST00000357325 NYXQ9GZU5 481 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 LTBP4Q8N2S1 1624 aa28.48■■■□□ 2.15
HDGF-201ENST00000357325 NPHP1O15259 732 aa28.47■■■□□ 2.15
HDGF-201ENST00000357325 CDK11BP21127 795 aaKnown RBP28.47■■■□□ 2.15
HDGF-201ENST00000357325 ADKP55263 362 aaKnown RBP28.47■■■□□ 2.15
HDGF-201ENST00000357325 IL17AQ16552 155 aa28.47■■■□□ 2.15
HDGF-201ENST00000357325 ENOX1Q8TC92 643 aaKnown RBP28.47■■■□□ 2.15
HDGF-201ENST00000357325 NGLY1Q96IV0 654 aa28.47■■■□□ 2.15
HDGF-201ENST00000357325 IL17RBQ9NRM6 502 aa28.47■■■□□ 2.15
HDGF-201ENST00000357325 CALM1P0DP23 149 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 CALM2P0DP24 149 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 CALM3P0DP25 149 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 SYCP1Q15431 976 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 DIXDC1Q155Q3 683 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 TPTE2Q6XPS3 522 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 TBX2Q13207 712 aaPredicted RBP28.46■■■□□ 2.15
HDGF-201ENST00000357325 NFIXQ14938 502 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 STAG2Q8N3U4 1231 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 ATP8A2Q9NTI2 1148 aa28.46■■■□□ 2.15
HDGF-201ENST00000357325 SH3RF1Q7Z6J0 888 aa28.45■■■□□ 2.15
HDGF-201ENST00000357325 GPKOWQ92917 476 aaPredicted RBP eCLIP28.45■■■□□ 2.155e-9■■■■■ 30.4
HDGF-201ENST00000357325 ANKRD2Q9GZV1 360 aa28.45■■■□□ 2.15
HDGF-201ENST00000357325 KIAA1551Q9HCM1 1747 aa28.45■■■□□ 2.14
HDGF-201ENST00000357325 SLFN14P0C7P3 912 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms