RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PDE6BP35913 854 aa13.08□□□□□ -0.32
COL9A1-202ENST00000357250 ZAP70P43403 619 aa13.08□□□□□ -0.32
COL9A1-202ENST00000357250 KIAA1468Q9P260 1216 aa13.08□□□□□ -0.32
COL9A1-202ENST00000357250 PAK2Q13177 524 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 MTMR3Q13615 1198 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 UTP11Q9Y3A2 253 aaKnown RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 PTH1RQ03431 593 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 CCDC114Q96M63 670 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 PLIN2Q99541 437 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 HAUS7Q99871 368 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 TXKP42681 527 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 SLC8A3P57103 927 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 PKP1Q13835 747 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 PUS3Q9BZE2 481 aaKnown RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 TLDC2A0PJX2 215 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 CMA1P23946 247 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 MICALL1Q8N3F8 863 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 MRFAP1L1Q96HT8 127 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 FEZ2Q9UHY8 353 aaPredicted RBP13.07□□□□□ -0.32
COL9A1-202ENST00000357250 FAM169AQ9Y6X4 670 aa13.07□□□□□ -0.32
COL9A1-202ENST00000357250 CROCC2H7BZ55 1655 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 ZEB2O60315 1214 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 BCRP11274 1271 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 BIRC3Q13489 604 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 ME3Q16798 604 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 HERC4Q5GLZ8 1057 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-202ENST00000357250 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 MAK16Q9BXY0 300 aaKnown RBP13.06□□□□□ -0.32
COL9A1-202ENST00000357250 CEP152O94986 1710 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 GLI2P10070 1586 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 ATP2C2O75185 946 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 GJC1P36383 396 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 SLC1A4P43007 532 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 PPFIA1Q13136 1202 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 CALCRLQ16602 461 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 CFAP221Q4G0U5 840 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 CABP7Q86V35 215 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
COL9A1-202ENST00000357250 PCCAP05165 728 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-202ENST00000357250 ZNF365Q70YC5 407 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 ZNF654Q8IZM8 581 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 UBLCP1Q8WVY7 318 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-202ENST00000357250 TRIM7Q9C029 511 aa13.06□□□□□ -0.32
COL9A1-202ENST00000357250 LACTBP83111 547 aaPredicted RBP13.05□□□□□ -0.32
COL9A1-202ENST00000357250 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 NOSTRINQ8IVI9 506 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 CCDC63Q8NA47 563 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 STRN3Q13033 797 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 WHAMMP3Q1A5X7 153 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 RAB3IL1Q8TBN0 382 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 TMOD4Q9NZQ9 345 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 ALKQ9UM73 1620 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 ZMYM6O95789 1325 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 A0A1W2PQ27 194 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 A0A1W2PQ64 194 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 A0A1W2PQD8 194 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 CTSWP56202 376 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 PPARAQ07869 468 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 PLS1Q14651 629 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 BRD3Q15059 726 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 TTC31Q49AM3 519 aaPredicted RBP13.05□□□□□ -0.32
COL9A1-202ENST00000357250 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 ZBTB1Q9Y2K1 713 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 ZNF500O60304 480 aaPredicted RBP13.05□□□□□ -0.32
COL9A1-202ENST00000357250 GAS8O95995 478 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 NT5C2P49902 561 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 MADDQ8WXG6 1647 aa13.05□□□□□ -0.32
COL9A1-202ENST00000357250 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
COL9A1-202ENST00000357250 UBE3CQ15386 1083 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 TAOK1Q7L7X3 1001 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 PARP2Q9UGN5 583 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
COL9A1-202ENST00000357250 MTMR6Q9Y217 621 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 JAK2O60674 1132 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
COL9A1-202ENST00000357250 CCDC25Q86WR0 208 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 OR8K1Q8NGG5 319 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 CIAO1O76071 339 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 KLHL30Q0D2K2 578 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 SFMBT2Q5VUG0 894 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms