RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 ATP8B2P98198 1209 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 MDM2Q00987 491 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 APBA2Q99767 749 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 MTMR10Q9NXD2 777 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 STXBP5LQ9Y2K9 1186 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 RABGAP1Q9Y3P9 1069 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
UBE2D3-206ENST00000357194 CNMDO75829 334 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 GLRX3O76003 335 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 USP5P45974 858 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 CCNA1P78396 465 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 RAB3GAP1Q15042 981 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 WDR78Q5VTH9 848 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 FEZ1Q99689 392 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 SENP6Q9GZR1 1112 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 CCDC8Q9H0W5 538 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 SERPINB13Q9UIV8 391 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
UBE2D3-206ENST00000357194 PTPREP23469 700 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 USP14P54578 494 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 MFSD14CQ5VZR4 134 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 CERS3Q8IU89 383 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 KIAA1683Q9H0B3 1180 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 EHD4Q9H223 541 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 TLR7Q9NYK1 1049 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
UBE2D3-206ENST00000357194 LAMA2P24043 3122 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 CUL9Q8IWT3 2517 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 VCAM1P19320 739 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 CNGA1P29973 690 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 ATP2B2Q01814 1243 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 ACER1Q8TDN7 264 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 EAF2Q96CJ1 260 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 BTBD7Q9P203 1132 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 NOP58Q9Y2X3 529 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
UBE2D3-206ENST00000357194 HOXC6P09630 235 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 CYP2C19P33261 490 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 PLCD1P51178 756 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 NPLOC4Q8TAT6 608 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 LPAR1Q92633 364 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 LBHD1Q9BQE6 289 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 CABP5Q9NP86 173 aa12.45□□□□□ -0.42
UBE2D3-206ENST00000357194 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-206ENST00000357194 MSCO60682 206 aa12.44□□□□□ -0.42
UBE2D3-206ENST00000357194 SHMT1P34896 483 aa12.44□□□□□ -0.42
UBE2D3-206ENST00000357194 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-206ENST00000357194 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
UBE2D3-206ENST00000357194 GRB14Q14449 540 aa12.44□□□□□ -0.42
UBE2D3-206ENST00000357194 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-206ENST00000357194 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 CCER2I3L3R5 266 aa12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 DNM1LO00429 736 aa12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 POLR3DP05423 398 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 GUCY1A2P33402 732 aa12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 DPP9Q86TI2 863 aa12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 TRPV1Q8NER1 839 aa12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-206ENST00000357194 COG2Q14746 738 aa12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 SEPT2Q15019 361 aa12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 GJC2Q5T442 439 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 FAM109BQ6ICB4 259 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 TMED8Q6PL24 325 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 FTSJ3Q8IY81 847 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 HOXC10Q9NYD6 342 aa12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 PRKAG2Q9UGJ0 569 aa12.42□□□□□ -0.42
UBE2D3-206ENST00000357194 MAGEB6P1A0A0J9YX57 407 aa12.41□□□□□ -0.42
UBE2D3-206ENST00000357194 A0A1W2PRG0 241 aa12.41□□□□□ -0.42
UBE2D3-206ENST00000357194 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-206ENST00000357194 STRNO43815 780 aa12.41□□□□□ -0.42
UBE2D3-206ENST00000357194 IGHA2P01877 340 aa12.41□□□□□ -0.42
UBE2D3-206ENST00000357194 CYBAP13498 195 aa12.41□□□□□ -0.42
UBE2D3-206ENST00000357194 ADORA2AP29274 412 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms