RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PPANQ9NQ55 473 aaKnown RBP16.46■□□□□ 0.22
CHD4-201ENST00000357008 PSDA5PKW4 1024 aaPredicted RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 ARHGEF35A5YM69 484 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 CCDC169A6NNP5 214 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 CASQ2O14958 399 aaPredicted RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 KRT15P19012 456 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 RNF10Q8N5U6 811 aaKnown RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 TRIML1Q8N9V2 468 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 BLZF1Q9H2G9 400 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 HYOU1Q9Y4L1 999 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 DTNBO60941 627 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 CTNNA1P35221 906 aaKnown RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 DDB1Q16531 1140 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 USP28Q96RU2 1077 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 SAP30BPQ9UHR5 308 aaKnown RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 ADCY7P51828 1080 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 ATP10BO94823 1461 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 RGS16O15492 202 aaPredicted RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 GNA14O95837 355 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 CMA1P23946 247 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 STAMQ92783 540 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 CAPN7Q9Y6W3 813 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 I3L4J1 428 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 PDE8AO60658 829 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
CHD4-201ENST00000357008 PARP10Q53GL7 1025 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 ANKRD20A3Q5VUR7 823 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 CERS3Q8IU89 383 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 ABCC4O15439 1325 aa16.45■□□□□ 0.22
CHD4-201ENST00000357008 CTDSPL2Q05D32 466 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 PPP2R5EQ16537 467 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 DESI2Q9BSY9 194 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 JAG2Q9Y219 1238 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 SBNO1A3KN83 1393 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 KCNJ18B7U540 433 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 CHMP2AO43633 222 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 IRX5P78411 483 aaPredicted RBP16.44■□□□□ 0.22
CHD4-201ENST00000357008 GCKRQ14397 625 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 KCNJ12Q14500 433 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 CALCRLQ16602 461 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 VEZTQ9HBM0 779 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 GAS2L3Q86XJ1 694 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 LPIN2Q92539 896 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 EYA3Q99504 573 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 AMFRQ9UKV5 643 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 RASA3Q14644 834 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 GOLGA5Q8TBA6 731 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
CHD4-201ENST00000357008 CCT6BQ92526 530 aa16.44■□□□□ 0.22
CHD4-201ENST00000357008 YTHDC2Q9H6S0 1430 aaKnown RBP16.43■□□□□ 0.22
CHD4-201ENST00000357008 NCAPH2Q6IBW4 605 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 PFKFB2O60825 505 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 ZWINTO95229 277 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 TCP1P17987 556 aaKnown RBP16.43■□□□□ 0.22
CHD4-201ENST00000357008 DNM2P50570 870 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 CAPS2Q9BXY5 557 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 NLRC4Q9NPP4 1024 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 EXOC3O60645 756 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 HOMER3Q9NSC5 361 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
CHD4-201ENST00000357008 SP4Q02446 784 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 GEN1Q17RS7 908 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 STX2P32856 288 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 PKD2L1Q9P0L9 805 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
CHD4-201ENST00000357008 RGS12O14924 1447 aa16.43■□□□□ 0.22
CHD4-201ENST00000357008 DKC1O60832 514 aaKnown RBP eCLIP16.42■□□□□ 0.221e-323■■■□□ 16.6
CHD4-201ENST00000357008 STK10O94804 968 aaKnown RBP16.42■□□□□ 0.22
CHD4-201ENST00000357008 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 SEPT14Q6ZU15 432 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 NOSTRINQ8IVI9 506 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 NELFCDQ8IXH7 590 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 AFAP1L2Q8N4X5 818 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 VPS54Q9P1Q0 977 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 MORC3Q14149 939 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 BCAS4Q8TDM0 211 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 HARSP12081 509 aaKnown RBP16.42■□□□□ 0.22
CHD4-201ENST00000357008 TRPC3Q13507 836 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 NUF2Q9BZD4 464 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 ZNF532Q9HCE3 1301 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 ATP8B1O43520 1251 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 SLC8A3P57103 927 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 PKP1Q13835 747 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 GABPB2Q8TAK5 448 aaPredicted RBP16.42■□□□□ 0.22
CHD4-201ENST00000357008 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 DCUN1D2Q6PH85 259 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 CEP120Q8N960 986 aa16.42■□□□□ 0.22
CHD4-201ENST00000357008 RABGGTAQ92696 567 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms