RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 SDR42E1Q8WUS8 393 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 DHX58Q96C10 678 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 CARD6Q9BX69 1037 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 RBM28Q9NW13 759 aaKnown RBP20.78■□□□□ 0.92
SPNS3-201ENST00000355530 VPS54Q9P1Q0 977 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 FHOD1Q9Y613 1164 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 PRPF3O43395 683 aaKnown RBP20.78■□□□□ 0.92
SPNS3-201ENST00000355530 FUT2Q10981 343 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 PKN1Q16512 942 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 TMCO3Q6UWJ1 677 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 CREBRFQ8IUR6 639 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 ENAHQ8N8S7 591 aaPredicted RBP20.78■□□□□ 0.92
SPNS3-201ENST00000355530 SHISA4Q96DD7 197 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 PANX2Q96RD6 677 aa20.78■□□□□ 0.92
SPNS3-201ENST00000355530 ZSCAN10Q96SZ4 725 aaPredicted RBP20.78■□□□□ 0.92
SPNS3-201ENST00000355530 NTSR2O95665 410 aa20.77■□□□□ 0.92
SPNS3-201ENST00000355530 PCP11498 1178 aaKnown RBP20.77■□□□□ 0.92
SPNS3-201ENST00000355530 SPATA1Q5VX52 437 aa20.77■□□□□ 0.92
SPNS3-201ENST00000355530 SH3RF1Q7Z6J0 888 aa20.77■□□□□ 0.92
SPNS3-201ENST00000355530 CATIPQ7Z7H3 387 aa20.77■□□□□ 0.92
SPNS3-201ENST00000355530 CDC5LQ99459 802 aaKnown RBP20.77■□□□□ 0.92
SPNS3-201ENST00000355530 BRMS1Q9HCU9 246 aa20.77■□□□□ 0.92
SPNS3-201ENST00000355530 BAZ2AQ9UIF9 1905 aaKnown RBP20.77■□□□□ 0.92
SPNS3-201ENST00000355530 CAMTA2O94983 1202 aa20.77■□□□□ 0.91
SPNS3-201ENST00000355530 PNMA6AP0CW24 399 aaPredicted RBP20.77■□□□□ 0.91
SPNS3-201ENST00000355530 CALM1P0DP23 149 aa20.77■□□□□ 0.91
SPNS3-201ENST00000355530 CALM2P0DP24 149 aa20.77■□□□□ 0.91
SPNS3-201ENST00000355530 CALM3P0DP25 149 aa20.77■□□□□ 0.91
SPNS3-201ENST00000355530 MAP3K9P80192 1104 aa20.77■□□□□ 0.91
SPNS3-201ENST00000355530 FAM177A1Q8N128 213 aaPredicted RBP20.77■□□□□ 0.91
SPNS3-201ENST00000355530 WDR24Q96S15 920 aa20.77■□□□□ 0.91
SPNS3-201ENST00000355530 GNL3LQ9NVN8 582 aaKnown RBP20.77■□□□□ 0.91
SPNS3-201ENST00000355530 A0A087X0B3 334 aa20.76■□□□□ 0.91
SPNS3-201ENST00000355530 FAM205CA6NFA0 338 aa20.76■□□□□ 0.91
SPNS3-201ENST00000355530 AKR1B15C9JRZ8 316 aaPredicted RBP20.76■□□□□ 0.91
SPNS3-201ENST00000355530 ZRANB2O95218 330 aaKnown RBP eCLIP20.76■□□□□ 0.91
SPNS3-201ENST00000355530 IFIT1BQ5T764 474 aaKnown RBP20.76■□□□□ 0.91
SPNS3-201ENST00000355530 GSDMAQ96QA5 445 aa20.76■□□□□ 0.91
SPNS3-201ENST00000355530 RIOK1Q9BRS2 568 aaKnown RBP20.76■□□□□ 0.91
SPNS3-201ENST00000355530 NAA15Q9BXJ9 866 aaKnown RBP20.76■□□□□ 0.91
SPNS3-201ENST00000355530 ABCF2Q9UG63 623 aa20.76■□□□□ 0.91
SPNS3-201ENST00000355530 MRFAP1Q9Y605 127 aa20.76■□□□□ 0.91
SPNS3-201ENST00000355530 ZNF335Q9H4Z2 1342 aaPredicted RBP20.76■□□□□ 0.91
SPNS3-201ENST00000355530 SEMA3EO15041 775 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 CCDC175P0C221 793 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 CRKLP46109 303 aaKnown RBP20.75■□□□□ 0.91
SPNS3-201ENST00000355530 CUL4BQ13620 913 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 APTXQ7Z2E3 356 aaKnown RBP20.75■□□□□ 0.91
SPNS3-201ENST00000355530 SYMPKQ92797 1274 aaKnown RBP20.75■□□□□ 0.91
SPNS3-201ENST00000355530 KIFC2Q96AC6 838 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 PAGE5Q96GU1 130 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 EPSTI1Q96J88 318 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 CTAGE1Q96RT6 745 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 BRIP1Q9BX63 1249 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 COL1A1P02452 1464 aaPredicted RBP20.75■□□□□ 0.91
SPNS3-201ENST00000355530 CDKAL1Q5VV42 579 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 IQCA1Q86XH1 822 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 LAMB1P07942 1786 aa20.75■□□□□ 0.91
SPNS3-201ENST00000355530 COL4A1P02462 1669 aa20.74■□□□□ 0.91
SPNS3-201ENST00000355530 DDAH1O94760 285 aa20.74■□□□□ 0.91
SPNS3-201ENST00000355530 DPYDQ12882 1025 aa20.74■□□□□ 0.91
SPNS3-201ENST00000355530 NIP7Q9Y221 180 aaKnown RBP eCLIP20.74■□□□□ 0.91
SPNS3-201ENST00000355530 AFMP43652 599 aa20.74■□□□□ 0.91
SPNS3-201ENST00000355530 PPP2R3AQ06190 1150 aa20.74■□□□□ 0.91
SPNS3-201ENST00000355530 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
SPNS3-201ENST00000355530 PPFIBP1Q86W92 1011 aa20.74■□□□□ 0.91
SPNS3-201ENST00000355530 IQSEC3Q9UPP2 1182 aaPredicted RBP20.74■□□□□ 0.91
SPNS3-201ENST00000355530 CASZ1Q86V15 1759 aa20.73■□□□□ 0.91
SPNS3-201ENST00000355530 COL16A1Q07092 1604 aaPredicted RBP20.73■□□□□ 0.91
SPNS3-201ENST00000355530 ATP8B1O43520 1251 aa20.73■□□□□ 0.91
SPNS3-201ENST00000355530 PLEKHA8P1O95397 391 aa20.73■□□□□ 0.91
SPNS3-201ENST00000355530 FGRP09769 529 aa20.73■□□□□ 0.91
SPNS3-201ENST00000355530 GPR161Q8N6U8 529 aaKnown RBP20.73■□□□□ 0.91
SPNS3-201ENST00000355530 TNFRSF25Q93038 417 aa20.73■□□□□ 0.91
SPNS3-201ENST00000355530 ADD3Q9UEY8 706 aaKnown RBP20.73■□□□□ 0.91
SPNS3-201ENST00000355530 PRDM1O75626 825 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 CD44P16070 742 aaKnown RBP20.72■□□□□ 0.91
SPNS3-201ENST00000355530 PBX1P40424 430 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 TROAPQ12815 778 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 KLHL10Q6JEL2 608 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 IGSF22Q8N9C0 903 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 DESI2Q9BSY9 194 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 V9GY48 417 aaPredicted RBP20.72■□□□□ 0.91
SPNS3-201ENST00000355530 ATP2C1P98194 919 aaPredicted RBP20.72■□□□□ 0.91
SPNS3-201ENST00000355530 FILIP1LQ4L180 1135 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 TTC38Q5R3I4 469 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 TMTC3Q6ZXV5 915 aa20.72■□□□□ 0.91
SPNS3-201ENST00000355530 MYH14Q7Z406 1995 aaKnown RBP20.72■□□□□ 0.91
SPNS3-201ENST00000355530 MYH13Q9UKX3 1938 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 TEX33O43247 280 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 ATP6V1AP38606 617 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 UBE4AQ14139 1066 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 TAF3Q5VWG9 929 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 RSRC2Q7L4I2 434 aaKnown RBP20.71■□□□□ 0.91
SPNS3-201ENST00000355530 PYM1Q9BRP8 204 aaKnown RBP20.71■□□□□ 0.91
SPNS3-201ENST00000355530 MRPL44Q9H9J2 332 aaKnown RBP20.71■□□□□ 0.91
SPNS3-201ENST00000355530 ST7Q9NRC1 585 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 CNTNAP5Q8WYK1 1306 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 SOWAHDA6NJG2 315 aa20.71■□□□□ 0.91
SPNS3-201ENST00000355530 GYG1P46976 350 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms