RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 PSMD2Q13200 908 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 NUDT16Q96DE0 195 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 RMDN2Q96LZ7 410 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 CSRNP1Q96S65 589 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 SUPT3HB4E1H0 165 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 ASIC2Q16515 512 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 DEPTORQ8TB45 409 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 WDR64B1ANS9 1081 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 TTLL7Q6ZT98 887 aa12.69□□□□□ -0.38
NUDCD3-202ENST00000355451 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 TCP10Q12799 353 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 MIGA1Q8NAN2 632 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 GSDMAQ96QA5 445 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 NCAPH2Q6IBW4 605 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 PATL1Q86TB9 770 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 BAZ1AQ9NRL2 1556 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 TNNC2P02585 160 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 TYRO3Q06418 890 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 RNF10Q8N5U6 811 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 MRPL44Q9H9J2 332 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 EPHB1P54762 984 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 IGBP1P78318 339 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 SRGAP2BP0DMP2 458 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 ZBTB8OSQ8IWT0 167 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 CCDC87Q9NVE4 849 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 DOLKQ9UPQ8 538 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 ARL4DP49703 201 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 EFCAB13Q8IY85 973 aa12.68□□□□□ -0.38
NUDCD3-202ENST00000355451 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 EVI5O60447 810 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 UFL1O94874 794 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 NCAPG2Q86XI2 1143 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 SUPT20HQ8NEM7 779 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■□□□□ 11.3
NUDCD3-202ENST00000355451 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 HACD3Q9P035 362 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 GNPTABQ3T906 1256 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 NDUFAF2Q8N183 169 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 SNX19Q92543 992 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 TRIM31Q9BZY9 425 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 LZTFL1Q9NQ48 299 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 ZNF75DP51815 510 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 HESX1Q9UBX0 185 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 ADCY5O95622 1261 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 TADA2BQ86TJ2 420 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 MYO1AQ9UBC5 1043 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 CHRNA2Q15822 529 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 HSP90AA5PQ58FG0 334 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 E4F1Q66K89 784 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 ZNF513Q8N8E2 541 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 DNAI1Q9UI46 699 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 VPS8Q8N3P4 1428 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 APOA4P06727 396 aa12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 PPHLN1Q8NEY8 458 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-202ENST00000355451 H3BRJ5 948 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 ARHGAP25P42331 645 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 RECQLP46063 649 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 VPS41P49754 854 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 DZIP3Q86Y13 1208 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 FAM76AQ8TAV0 307 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 Q9H521 79 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 EPS15L1Q9UBC2 864 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 GARSP41250 739 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 A6NJR5 290 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 ZBTB17Q13105 803 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 SLMAPQ14BN4 828 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 RINT1Q6NUQ1 792 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 ANXA13P27216 316 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 KRT80Q6KB66 452 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 DPP8Q6V1X1 898 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 SOX5P35711 763 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 ZNF653Q96CK0 615 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 EPAS1Q99814 870 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 RHOXF2Q9BQY4 288 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 GOLGA8QA0A0J9YX86 632 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 GOLGA8OA6NCC3 632 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 GOLGA8NF8WBI6 632 aa12.66□□□□□ -0.38
NUDCD3-202ENST00000355451 CCDC105Q8IYK2 499 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms