RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TUBB4BP68371 445 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 GOLGA8FQ08AF8 430 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 GOLGA8DPQ0D2H9 430 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 TTLL7Q6ZT98 887 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 MMRN2Q9H8L6 949 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 FANCLQ9NW38 375 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 FGAP02671 866 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 NOP2P46087 812 aaKnown RBP13.84□□□□□ -0.19
COLCA1-201ENST00000355430 IFFO1Q0D2I5 559 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 ARID5BQ14865 1188 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 PTPN21Q16825 1174 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 RCOR1Q9UKL0 485 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 PPP2R2CQ9Y2T4 447 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
COLCA1-201ENST00000355430 ATP10DQ9P241 1426 aa13.83□□□□□ -0.19
COLCA1-201ENST00000355430 CLTCQ00610 1675 aaKnown RBP13.83□□□□□ -0.19
COLCA1-201ENST00000355430 DOK7Q18PE1 504 aa13.83□□□□□ -0.19
COLCA1-201ENST00000355430 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.19
COLCA1-201ENST00000355430 USP40Q9NVE5 1235 aa13.83□□□□□ -0.19
COLCA1-201ENST00000355430 RBM28Q9NW13 759 aaKnown RBP13.83□□□□□ -0.19
COLCA1-201ENST00000355430 ZMYM6O95789 1325 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 A0A1W2PQ27 194 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 A0A1W2PQ64 194 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 A0A1W2PQD8 194 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 TBCAO75347 108 aaKnown RBP13.83□□□□□ -0.2
COLCA1-201ENST00000355430 ZBTB7AO95365 584 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 TCP10Q12799 353 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 CYP26C1Q6V0L0 522 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 MICALCLQ6ZW33 695 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 CCDC42Q96M95 316 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 MACROD2A1Z1Q3 448 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 ETF1P62495 437 aaKnown RBP13.83□□□□□ -0.2
COLCA1-201ENST00000355430 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 PIK3AP1Q6ZUJ8 805 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 BICD1Q96G01 975 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 LEMD3Q9Y2U8 911 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 CALML3P27482 149 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 CETN1Q12798 172 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 CMTR1Q8N1G2 835 aaKnown RBP13.83□□□□□ -0.2
COLCA1-201ENST00000355430 SPATA5Q8NB90 893 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 PIGBQ92521 554 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 STAMQ92783 540 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
COLCA1-201ENST00000355430 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
COLCA1-201ENST00000355430 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 TAB2Q9NYJ8 693 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 TCERG1LQ5VWI1 586 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 DTHD1Q6ZMT9 781 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 FBXO18Q8NFZ0 1043 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
COLCA1-201ENST00000355430 SPC25Q9HBM1 224 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 ARMC9Q7Z3E5 817 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 MASTLQ96GX5 879 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 PSDA5PKW4 1024 aaPredicted RBP13.82□□□□□ -0.2
COLCA1-201ENST00000355430 SUPT20HL1Q3ZLR7 823 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 SYCP3Q8IZU3 236 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 NAP1L4Q99733 375 aaKnown RBP13.82□□□□□ -0.2
COLCA1-201ENST00000355430 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
COLCA1-201ENST00000355430 AATFQ9NY61 560 aaKnown RBP eCLIP13.82□□□□□ -0.2
COLCA1-201ENST00000355430 CRB1P82279 1406 aa13.82□□□□□ -0.2
COLCA1-201ENST00000355430 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 GNA11P29992 359 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 ABT1Q9ULW3 272 aaKnown RBP13.81□□□□□ -0.2
COLCA1-201ENST00000355430 PRDM1O75626 825 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 ADORA1P30542 326 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 TXNRD1Q16881 649 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 TTC38Q5R3I4 469 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 TAOK3Q9H2K8 898 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 SPTLC3Q9NUV7 552 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 NEXMIFQ5QGS0 1516 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 NRXN1Q9ULB1 1477 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 UTP14CQ5TAP6 766 aaKnown RBP13.81□□□□□ -0.2
COLCA1-201ENST00000355430 BLZF1Q9H2G9 400 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 KCNQ4P56696 695 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 PAK1Q13153 545 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 APBB1IPQ7Z5R6 666 aaPredicted RBP13.81□□□□□ -0.2
COLCA1-201ENST00000355430 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
COLCA1-201ENST00000355430 C1orf167Q5SNV9 1468 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 RIMS1Q86UR5 1692 aaKnown RBP13.81□□□□□ -0.2
COLCA1-201ENST00000355430 SMC1AQ14683 1233 aaKnown RBP13.81□□□□□ -0.2
COLCA1-201ENST00000355430 DNAJC21Q5F1R6 531 aaKnown RBP13.81□□□□□ -0.2
COLCA1-201ENST00000355430 KIAA0825Q8IV33 1275 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 NOSTRINQ8IVI9 506 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 VPS54Q9P1Q0 977 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 DIP2CQ9Y2E4 1556 aa13.81□□□□□ -0.2
COLCA1-201ENST00000355430 DIP2BQ9P265 1576 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 OPA1O60313 960 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 TRIM14Q14142 442 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 PTPN12Q05209 780 aaKnown RBP13.8□□□□□ -0.2
COLCA1-201ENST00000355430 ZYXQ15942 572 aaKnown RBP13.8□□□□□ -0.2
COLCA1-201ENST00000355430 LINC00301Q8NCQ3 95 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 SLF1Q9BQI6 1058 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 ARID5AQ03989 594 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 PRPF4BQ13523 1007 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms