RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 PTGER2P43116 358 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 AKAP17AQ02040 695 aaKnown RBP26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 NFIAQ12857 509 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 CFAP100Q494V2 611 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 GJB4Q9NTQ9 266 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 RCOR1Q9UKL0 485 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 HDAC9Q9UKV0 1011 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 PCDHAC2Q9Y5I4 1007 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 ARFGEF1Q9Y6D6 1849 aa26.48■■□□□ 1.83
SCAMP3-202ENST00000355379 GREB1LQ9C091 1923 aaPredicted RBP26.48■■□□□ 1.83
SCAMP3-202ENST00000355379 PSMD14O00487 310 aa26.48■■□□□ 1.83
SCAMP3-202ENST00000355379 ZNF445P59923 1031 aa26.48■■□□□ 1.83
SCAMP3-202ENST00000355379 TMEM63CQ9P1W3 806 aa26.48■■□□□ 1.83
SCAMP3-202ENST00000355379 FSD2A1L4K1 749 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 GUCY1A2P33402 732 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 GRM4Q14833 912 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 ZSCAN23Q3MJ62 389 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 AGBL3Q8NEM8 1001 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 TMEM47Q9BQJ4 181 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 TAOK3Q9H2K8 898 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 FAM198AQ9UFP1 575 aa26.47■■□□□ 1.83
SCAMP3-202ENST00000355379 ENTPD3O75355 529 aa26.46■■□□□ 1.83
SCAMP3-202ENST00000355379 RAD17O75943 681 aa26.46■■□□□ 1.83
SCAMP3-202ENST00000355379 PLEKHA8P1O95397 391 aa26.46■■□□□ 1.83
SCAMP3-202ENST00000355379 GNAQP50148 359 aa26.46■■□□□ 1.83
SCAMP3-202ENST00000355379 CMTR1Q8N1G2 835 aaKnown RBP26.46■■□□□ 1.83
SCAMP3-202ENST00000355379 RBM27Q9P2N5 1060 aaKnown RBP26.46■■□□□ 1.83
SCAMP3-202ENST00000355379 CNTNAP5Q8WYK1 1306 aa26.46■■□□□ 1.83
SCAMP3-202ENST00000355379 U2AF2P26368 475 aaKnown RBP eCLIP26.45■■□□□ 1.837e-8■□□□□ 11
SCAMP3-202ENST00000355379 LTBP3Q9NS15 1303 aa26.45■■□□□ 1.83
SCAMP3-202ENST00000355379 KIF28PB7ZC32 967 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 MMP1P03956 469 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 TOP1P11387 765 aaKnown RBP26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 MYSM1Q5VVJ2 828 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 CCDC82Q8N4S0 544 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 SRBD1Q8N5C6 995 aaKnown RBP26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 USP28Q96RU2 1077 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 RTEL1Q9NZ71 1219 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 IGKV6D-41A0A0C4DH26 115 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 GOLGA6L3A6NEY3 463 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 XBP1P17861 261 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 SHMT1P34896 483 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 SAFBQ15424 915 aaKnown RBP eCLIP26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 PKN1Q16512 942 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 ZFPM1Q8IX07 1006 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 MTMR14Q8NCE2 650 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 PRMT6Q96LA8 375 aaPredicted RBP26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 TDRD3Q9H7E2 651 aaKnown RBP26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 PI4KBQ9UBF8 816 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 PPP1R1BQ9UD71 204 aaPredicted RBP26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 STX8Q9UNK0 236 aa26.44■■□□□ 1.82
SCAMP3-202ENST00000355379 ATRNL1Q5VV63 1379 aa26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 PSDA5PKW4 1024 aaPredicted RBP26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 UBE2Q2LH0YL09 131 aa26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 MMP14P50281 582 aa26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 FOXP4Q8IVH2 680 aaPredicted RBP26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 KLHL34Q8N239 644 aa26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 CEP95Q96GE4 821 aa26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 CCDC17Q96LX7 622 aa26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 LZTS2Q9BRK4 669 aa26.43■■□□□ 1.82
SCAMP3-202ENST00000355379 SPDYE2BA6NHP3 402 aa26.42■■□□□ 1.82
SCAMP3-202ENST00000355379 NFKBIEO00221 500 aa26.42■■□□□ 1.82
SCAMP3-202ENST00000355379 SPDYE6P0CI01 402 aa26.42■■□□□ 1.82
SCAMP3-202ENST00000355379 L1TD1Q5T7N2 865 aaKnown RBP26.42■■□□□ 1.82
SCAMP3-202ENST00000355379 OGFOD1Q8N543 542 aa26.42■■□□□ 1.82
SCAMP3-202ENST00000355379 POLR3EQ9NVU0 708 aa26.42■■□□□ 1.82
SCAMP3-202ENST00000355379 V9GY48 417 aaPredicted RBP26.42■■□□□ 1.82
SCAMP3-202ENST00000355379 GOLGA6L4A6NEF3 574 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 YEATS4O95619 227 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 AKR1B1P15121 316 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 CACNB3P54284 484 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 PPP4R3BQ5MIZ7 849 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 CCDC183Q5T5S1 534 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 METTL16Q86W50 562 aaKnown RBP26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 JDP2Q8WYK2 163 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 FOXP1Q9H334 677 aaPredicted RBP26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 MTMR4Q9NYA4 1195 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 MAD2L2Q9UI95 211 aa26.41■■□□□ 1.82
SCAMP3-202ENST00000355379 PALM3A6NDB9 673 aaPredicted RBP26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 NASPP49321 788 aaPredicted RBP26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 CXCL9Q07325 125 aa26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 GNL2Q13823 731 aaKnown RBP26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 DLGAP5Q15398 846 aa26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 CIAPIN1Q6FI81 312 aa26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 PGBD1Q96JS3 809 aa26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 TMOD2Q9NZR1 351 aa26.4■■□□□ 1.82
SCAMP3-202ENST00000355379 DDTLA6NHG4 134 aaPredicted RBP26.39■■□□□ 1.82
SCAMP3-202ENST00000355379 LETM1O95202 739 aaPredicted RBP26.39■■□□□ 1.82
SCAMP3-202ENST00000355379 TCP10Q12799 353 aa26.39■■□□□ 1.82
SCAMP3-202ENST00000355379 SH3BP5LQ7L8J4 393 aa26.39■■□□□ 1.82
SCAMP3-202ENST00000355379 BCS1LQ9Y276 419 aa26.39■■□□□ 1.82
SCAMP3-202ENST00000355379 SMARCA1P28370 1054 aa26.39■■□□□ 1.81
SCAMP3-202ENST00000355379 TNIP1Q15025 636 aa26.39■■□□□ 1.81
SCAMP3-202ENST00000355379 PFKFB3Q16875 520 aaPredicted RBP26.38■■□□□ 1.81
SCAMP3-202ENST00000355379 DIS3L2Q8IYB7 885 aaKnown RBP26.38■■□□□ 1.81
SCAMP3-202ENST00000355379 PHF20Q9BVI0 1012 aa26.38■■□□□ 1.81
SCAMP3-202ENST00000355379 KCNJ14Q9UNX9 436 aa26.38■■□□□ 1.81
SCAMP3-202ENST00000355379 ZBTB12Q9Y330 459 aaPredicted RBP26.38■■□□□ 1.81
SCAMP3-202ENST00000355379 MYH4Q9Y623 1939 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms