RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 TMEM139Q8IV31 216 aa25.12■■□□□ 1.61
NKX2-4-201ENST00000351817 GRAMD1CQ8IYS0 662 aa25.12■■□□□ 1.61
NKX2-4-201ENST00000351817 VPS54Q9P1Q0 977 aa25.12■■□□□ 1.61
NKX2-4-201ENST00000351817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.12■■□□□ 1.61
NKX2-4-201ENST00000351817 COL1A1P02452 1464 aaPredicted RBP25.11■■□□□ 1.61
NKX2-4-201ENST00000351817 BMP15O95972 392 aa25.11■■□□□ 1.61
NKX2-4-201ENST00000351817 CAVIN4Q5BKX8 364 aa25.11■■□□□ 1.61
NKX2-4-201ENST00000351817 REXO1L1PQ8IX06 675 aa25.11■■□□□ 1.61
NKX2-4-201ENST00000351817 SHISA4Q96DD7 197 aa25.11■■□□□ 1.61
NKX2-4-201ENST00000351817 DLEC1Q9Y238 1755 aa25.11■■□□□ 1.61
NKX2-4-201ENST00000351817 BAZ2AQ9UIF9 1905 aaKnown RBP25.11■■□□□ 1.61
NKX2-4-201ENST00000351817 CALM1P0DP23 149 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 CALM2P0DP24 149 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 CALM3P0DP25 149 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 ERCC5P28715 1186 aaPredicted RBP25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 PLCD1P51178 756 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 ZNF827Q17R98 1081 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 CT47A1Q5JQC4 288 aaPredicted RBP25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 TRIM65Q6PJ69 517 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 USP49Q70CQ1 688 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 IQCA1Q86XH1 822 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 DNAI1Q9UI46 699 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 GOLGA8FQ08AF8 430 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 GOLGA8DPQ0D2H9 430 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 SPECC1LQ69YQ0 1117 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 FBXO38Q6PIJ6 1188 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 CLEC4GQ6UXB4 293 aa25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 BSDC1Q9NW68 430 aaPredicted RBP25.1■■□□□ 1.61
NKX2-4-201ENST00000351817 FGRP09769 529 aa25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 SF3B3Q15393 1217 aaKnown RBP25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 HSP90AA4PQ58FG1 418 aa25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 SMIM22K7EJ46 135 aa25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 DYNLL1P63167 89 aaKnown RBP25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 PTPN21Q16825 1174 aa25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 TRMT44Q8IYL2 757 aaKnown RBP25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 FERMT2Q96AC1 680 aa25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 BAG1Q99933 345 aaPredicted RBP25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 BRMS1Q9HCU9 246 aa25.09■■□□□ 1.61
NKX2-4-201ENST00000351817 FAM205CA6NFA0 338 aa25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 STX10O60499 249 aa25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 SMIM5Q71RC9 77 aa25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 USP21Q9UK80 565 aa25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 V9GY48 417 aaPredicted RBP25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 SCN7AQ01118 1682 aa25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 THSD7AQ9UPZ6 1657 aa25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 CNTNAP4Q9C0A0 1308 aa25.08■■□□□ 1.61
NKX2-4-201ENST00000351817 DHX58Q96C10 678 aa25.08■■□□□ 1.6
NKX2-4-201ENST00000351817 PPP2R2CQ9Y2T4 447 aa25.08■■□□□ 1.6
NKX2-4-201ENST00000351817 GOLGA6L9A6NEM1 432 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 DDAH1O94760 285 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 PLEKHA8P1O95397 391 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 SLFN14P0C7P3 912 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 TROAPQ12815 778 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 ERFEQ4G0M1 354 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 MED15Q96RN5 788 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 SRRTQ9BXP5 876 aaKnown RBP25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 BTAF1O14981 1849 aa25.07■■□□□ 1.6
NKX2-4-201ENST00000351817 CYP2D7A0A087X1C5 515 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 PRDM1O75626 825 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 ERCC6LQ2NKX8 1250 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 EARS2Q5JPH6 523 aaKnown RBP25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 TC2NQ8N9U0 490 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 CTR9Q6PD62 1173 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 SH3RF1Q7Z6J0 888 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 SAMSN1Q9NSI8 373 aaKnown RBP25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 MINPP1Q9UNW1 487 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 CASZ1Q86V15 1759 aa25.06■■□□□ 1.6
NKX2-4-201ENST00000351817 NR1I3Q14994 352 aa25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 EPSTI1Q96J88 318 aa25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 FAM84BQ96KN1 310 aaPredicted RBP25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 TAF1P21675 1872 aa25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 A0A087X0B3 334 aa25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 WTIPA6NIX2 430 aaPredicted RBP25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 SEMA3EO15041 775 aa25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 C3orf67Q6ZVT6 689 aa25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 TMTC3Q6ZXV5 915 aa25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 SYMPKQ92797 1274 aaKnown RBP25.05■■□□□ 1.6
NKX2-4-201ENST00000351817 hCG_1642624A0A1W2PR95 340 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 VWA3AA6NCI4 1184 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 H2AFXP16104 143 aaPredicted RBP25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 ZNF384Q8TF68 577 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 PAGE5Q96GU1 130 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 SPATA31A6Q5VVP1 1343 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 A0A1B0GTH6 734 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 FAM182BQ5T319 152 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 KRT222Q8N1A0 295 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 LRRN4CLQ8ND94 238 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 TNFRSF25Q93038 417 aa25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.04■■□□□ 1.6
NKX2-4-201ENST00000351817 NHSQ6T4R5 1651 aa25.03■■□□□ 1.6
NKX2-4-201ENST00000351817 NPHP1O15259 732 aa25.03■■□□□ 1.6
NKX2-4-201ENST00000351817 ORC4O43929 436 aa25.03■■□□□ 1.6
NKX2-4-201ENST00000351817 AFMP43652 599 aa25.03■■□□□ 1.6
NKX2-4-201ENST00000351817 SPATA1Q5VX52 437 aa25.03■■□□□ 1.6
NKX2-4-201ENST00000351817 USP17L12C9JPN9 530 aa25.02■■□□□ 1.6
NKX2-4-201ENST00000351817 USP17L21D6R901 530 aa25.02■■□□□ 1.6
NKX2-4-201ENST00000351817 ADKP55263 362 aaKnown RBP25.02■■□□□ 1.6
NKX2-4-201ENST00000351817 TTC38Q5R3I4 469 aa25.02■■□□□ 1.6
NKX2-4-201ENST00000351817 FBXO33Q7Z6M2 555 aa25.02■■□□□ 1.6
NKX2-4-201ENST00000351817 GSDMAQ96QA5 445 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms