RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TCP11L1Q9NUJ3 509 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 ATP6V0A2Q9Y487 856 aa19.22■□□□□ 0.67
SAMM50-201ENST00000350028 MORC2Q9Y6X9 1032 aaPredicted RBP19.22■□□□□ 0.67
SAMM50-201ENST00000350028 LTBP1Q14766 1721 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 NRXN2Q9P2S2 1712 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 NMT2O60551 498 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 KRT2P35908 639 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 BTDP43251 543 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 RCSD1Q6JBY9 416 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 KAT14Q9H8E8 782 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 BRMS1Q9HCU9 246 aa19.21■□□□□ 0.67
SAMM50-201ENST00000350028 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 CNTNAP5Q8WYK1 1306 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 NPR1P16066 1061 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 ZNF75DP51815 510 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 NR5A1Q13285 461 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 MFSD14BQ5SR56 506 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 SARM1Q6SZW1 724 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 PLA2G4DQ86XP0 818 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 COL23A1Q86Y22 540 aaPredicted RBP19.2■□□□□ 0.66
SAMM50-201ENST00000350028 ZNF444Q8N0Y2 327 aaPredicted RBP19.2■□□□□ 0.66
SAMM50-201ENST00000350028 SRBD1Q8N5C6 995 aaKnown RBP19.2■□□□□ 0.66
SAMM50-201ENST00000350028 COA1Q9GZY4 146 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 VPS54Q9P1Q0 977 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 BECN2A8MW95 431 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 OFD1O75665 1012 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 PTPREP23469 700 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 BAG6P46379 1132 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 ILDR2Q71H61 639 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 ELOA2Q8IYF1 753 aaPredicted RBP19.2■□□□□ 0.66
SAMM50-201ENST00000350028 ZNF579Q8NAF0 562 aaKnown RBP19.2■□□□□ 0.66
SAMM50-201ENST00000350028 OXER1Q8TDS5 423 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 DYNLL2Q96FJ2 89 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 TRIM5Q9C035 493 aa19.2■□□□□ 0.66
SAMM50-201ENST00000350028 GAKO14976 1311 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 NLRP12P59046 1061 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 SF3B2Q13435 895 aaKnown RBP19.19■□□□□ 0.66
SAMM50-201ENST00000350028 MAPKAPK5Q8IW41 473 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 TEX11Q8IYF3 940 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 UPF1Q92900 1129 aaKnown RBP eCLIP19.19■□□□□ 0.66
SAMM50-201ENST00000350028 CLIC6Q96NY7 704 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 BPIFA3Q9BQP9 254 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 FAM13BQ9NYF5 915 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 SUGT1Q9Y2Z0 365 aa19.19■□□□□ 0.66
SAMM50-201ENST00000350028 SRGNP10124 158 aa19.18■□□□□ 0.66
SAMM50-201ENST00000350028 PDE6BP35913 854 aa19.18■□□□□ 0.66
SAMM50-201ENST00000350028 GNAQP50148 359 aa19.18■□□□□ 0.66
SAMM50-201ENST00000350028 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.18■□□□□ 0.66
SAMM50-201ENST00000350028 SHISA4Q96DD7 197 aa19.18■□□□□ 0.66
SAMM50-201ENST00000350028 CABP5Q9NP86 173 aa19.18■□□□□ 0.66
SAMM50-201ENST00000350028 IL17RBQ9NRM6 502 aa19.18■□□□□ 0.66
SAMM50-201ENST00000350028 FBXO2Q9UK22 296 aaPredicted RBP19.18■□□□□ 0.66
SAMM50-201ENST00000350028 CDK5RAP2Q96SN8 1893 aa19.18■□□□□ 0.66
SAMM50-201ENST00000350028 BMP15O95972 392 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 TSPY3P0CV98 308 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 TSPY8P0CW00 308 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 CDC25BP30305 580 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 CCDC125Q86Z20 511 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 DHX40Q8IX18 779 aaKnown RBP19.17■□□□□ 0.66
SAMM50-201ENST00000350028 ERCC4Q92889 916 aaPredicted RBP19.17■□□□□ 0.66
SAMM50-201ENST00000350028 KCNH3Q9ULD8 1083 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 PCDHB6Q9Y5E3 794 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 SRPRBQ9Y5M8 271 aaKnown RBP19.17■□□□□ 0.66
SAMM50-201ENST00000350028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.17■□□□□ 0.66
SAMM50-201ENST00000350028 TRIM75PA6NK02 468 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 SCG2P13521 617 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 PFKFB3Q16875 520 aaPredicted RBP19.17■□□□□ 0.66
SAMM50-201ENST00000350028 SLC4A8Q2Y0W8 1093 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 PNMA1Q8ND90 353 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 TUBE1Q9UJT0 475 aa19.17■□□□□ 0.66
SAMM50-201ENST00000350028 hCG_1642624A0A1W2PR95 340 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 PLCD1P51178 756 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 RHBDL3P58872 404 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 GRM4Q14833 912 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 KRBA2Q6ZNG9 492 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 C16orf86Q6ZW13 317 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 MPNDQ8N594 471 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 SPC24Q8NBT2 197 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 ZC3H12CQ9C0D7 883 aaKnown RBP19.16■□□□□ 0.66
SAMM50-201ENST00000350028 TTC12Q9H892 705 aaPredicted RBP19.16■□□□□ 0.66
SAMM50-201ENST00000350028 SAP30BPQ9UHR5 308 aaKnown RBP19.16■□□□□ 0.66
SAMM50-201ENST00000350028 PARP3Q9Y6F1 533 aa19.16■□□□□ 0.66
SAMM50-201ENST00000350028 RASA1P20936 1047 aa19.15■□□□□ 0.66
SAMM50-201ENST00000350028 GTF2IP78347 998 aa19.15■□□□□ 0.66
SAMM50-201ENST00000350028 TNFRSF25Q93038 417 aa19.15■□□□□ 0.66
SAMM50-201ENST00000350028 ZNF830Q96NB3 372 aaPredicted RBP19.15■□□□□ 0.66
SAMM50-201ENST00000350028 TMX4Q9H1E5 349 aaPredicted RBP19.15■□□□□ 0.66
SAMM50-201ENST00000350028 HOOK1Q9UJC3 728 aaKnown RBP19.15■□□□□ 0.66
SAMM50-201ENST00000350028 DDX60LQ5H9U9 1706 aaKnown RBP19.15■□□□□ 0.66
SAMM50-201ENST00000350028 RIMBP2O15034 1052 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 CDK8P49336 464 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 DRC7Q8IY82 874 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 AOPEPQ8N6M6 819 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 CNNM3Q8NE01 707 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 PIBF1Q8WXW3 757 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 MRFAP1L1Q96HT8 127 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 SH3GLB2Q9NR46 395 aa19.14■□□□□ 0.66
SAMM50-201ENST00000350028 FLT1P17948 1338 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms