RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 SAMM50Q9Y512 469 aa9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 CALD1Q05682 793 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-204ENST00000349311 RALBP1Q15311 655 aa9.7□□□□□ -0.86
UBE2D3-204ENST00000349311 C2CD4AQ8NCU7 369 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-204ENST00000349311 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
UBE2D3-204ENST00000349311 RECKO95980 971 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 ADH5P11766 374 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 LIG1P18858 919 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 NOS1P29475 1434 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 CLTCQ00610 1675 aaKnown RBP9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 LRRC14Q15048 493 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 TTBK2Q6IQ55 1244 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 ERMP1Q7Z2K6 904 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 MADDQ8WXG6 1647 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 GAL3ST3Q96A11 431 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 MYRFLQ96LU7 910 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 MYBBP1AQ9BQG0 1328 aaKnown RBP9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 MYO5BQ9ULV0 1848 aa9.69□□□□□ -0.86
UBE2D3-204ENST00000349311 KDM5AP29375 1690 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 ADGRB3O60242 1522 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 NPATQ14207 1427 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 KDM2BQ8NHM5 1336 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 GOLGA6L3A6NEY3 463 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 TMPRSS2O15393 492 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 RLBP1P12271 317 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 DRD2P14416 443 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 LIG3P49916 1009 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 LLGL2Q6P1M3 1020 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 FDX2Q6P4F2 183 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 GPBAR1Q8TDU6 330 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 TP53INP1Q96A56 240 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 ZC3H12CQ9C0D7 883 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 PDCL3Q9H2J4 239 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 CRIM1Q9NZV1 1036 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 PPP1R9AQ9ULJ8 1098 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 ISY1Q9ULR0 285 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 HIF3AQ9Y2N7 669 aa9.68□□□□□ -0.86
UBE2D3-204ENST00000349311 SYNMO15061 1565 aa9.67□□□□□ -0.86
UBE2D3-204ENST00000349311 RING1Q06587 406 aa9.67□□□□□ -0.86
UBE2D3-204ENST00000349311 PDE3AQ14432 1141 aa9.67□□□□□ -0.86
UBE2D3-204ENST00000349311 MAP1SQ66K74 1059 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-204ENST00000349311 PRR23CQ6ZRP0 262 aa9.67□□□□□ -0.86
UBE2D3-204ENST00000349311 KCNB2Q92953 911 aa9.67□□□□□ -0.86
UBE2D3-204ENST00000349311 MRRFQ96E11 262 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-204ENST00000349311 MYOM2P54296 1465 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 PTPN11Q06124 597 aaPredicted RBP9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 ZC3H12AQ5D1E8 599 aaKnown RBP9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 FAM20CQ8IXL6 584 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 C12orf50Q8NA57 414 aaPredicted RBP9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 PHC3Q8NDX5 983 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 EZH1Q92800 747 aaPredicted RBP9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 RHOVQ96L33 236 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 MAP7D2Q96T17 732 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 IQGAP1P46940 1657 aa9.66□□□□□ -0.86
UBE2D3-204ENST00000349311 EIF3AQ14152 1382 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-204ENST00000349311 FSD2A1L4K1 749 aa9.65□□□□□ -0.86
UBE2D3-204ENST00000349311 TFE3P19532 575 aaPredicted RBP9.65□□□□□ -0.86
UBE2D3-204ENST00000349311 POGKQ9P215 609 aa9.65□□□□□ -0.86
UBE2D3-204ENST00000349311 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
UBE2D3-204ENST00000349311 SPATA31D1Q6ZQQ2 1576 aa9.65□□□□□ -0.86
UBE2D3-204ENST00000349311 GPRASP1Q5JY77 1395 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 DYRK3O43781 588 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 SLFN14P0C7P3 912 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 ITGB7P26010 798 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 MRE11P49959 708 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 NBPF8Q3BBV2 869 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 CBX8Q9HC52 389 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 KCNQ5Q9NR82 932 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 METTL5Q9NRN9 209 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 RAD18Q9NS91 495 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 PCDHB5Q9Y5E4 795 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 NRXN1Q9ULB1 1477 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 BLMP54132 1417 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 TMEM131LA2VDJ0 1609 aa9.64□□□□□ -0.87
UBE2D3-204ENST00000349311 USP47Q96K76 1375 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 FER1L4A9Z1Z3 1794 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 FANCCQ00597 558 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 ID3Q02535 119 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 CDPF1Q6NVV7 123 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 CCDC84Q86UT8 332 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 TRIM42Q8IWZ5 723 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 TMEM87AQ8NBN3 555 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 UTP4Q969X6 686 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 ACSS3Q9H6R3 686 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 DISC1Q9NRI5 854 aa9.63□□□□□ -0.87
UBE2D3-204ENST00000349311 DHX15O43143 795 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 SART1O43290 800 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 GARTP22102 1010 aa9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 TERF1P54274 439 aa9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 ERVK-24P63145 666 aa9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 TMEM74Q96NL1 305 aa9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 TLR6Q9Y2C9 796 aa9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 RAXQ9Y2V3 346 aa9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 UGGT1Q9NYU2 1555 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms