RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 NCLP19338 710 aaKnown RBP21.69■■□□□ 1.06
PTN-201ENST00000348225 TRIM29Q14134 588 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 ZFPM1Q8IX07 1006 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 RNF26Q9BY78 433 aaPredicted RBP21.69■■□□□ 1.06
PTN-201ENST00000348225 FHDC1Q9C0D6 1143 aaPredicted RBP21.69■■□□□ 1.06
PTN-201ENST00000348225 TCHHQ07283 1943 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 SIPA1L1O43166 1804 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 MYO1BO43795 1136 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 DEXIO95424 95 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 KRT85P78386 507 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 AKAP17AQ02040 695 aaKnown RBP21.69■■□□□ 1.06
PTN-201ENST00000348225 DNM1Q05193 864 aaKnown RBP21.69■■□□□ 1.06
PTN-201ENST00000348225 SPDYE2Q495Y8 402 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 NBPF11Q86T75 865 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 FOXP4Q8IVH2 680 aaPredicted RBP21.69■■□□□ 1.06
PTN-201ENST00000348225 TMEM87AQ8NBN3 555 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 CCDC17Q96LX7 622 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 ZNF70Q9UC06 446 aaPredicted RBP21.69■■□□□ 1.06
PTN-201ENST00000348225 CNPY2Q9Y2B0 182 aa21.69■■□□□ 1.06
PTN-201ENST00000348225 DDTLA6NHG4 134 aaPredicted RBP21.68■■□□□ 1.06
PTN-201ENST00000348225 FZD9O00144 591 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 SHMT1P34896 483 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 GUCY1B3Q02153 619 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 PPP4R3BQ5MIZ7 849 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 FKBP1CQ5VVH2 108 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 TMTC3Q6ZXV5 915 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 TMEM47Q9BQJ4 181 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 MYH15Q9Y2K3 1946 aa21.68■■□□□ 1.06
PTN-201ENST00000348225 TOP1P11387 765 aaKnown RBP21.67■■□□□ 1.06
PTN-201ENST00000348225 NOVP48745 357 aa21.67■■□□□ 1.06
PTN-201ENST00000348225 SH3BP5LQ7L8J4 393 aa21.67■■□□□ 1.06
PTN-201ENST00000348225 CEP95Q96GE4 821 aa21.67■■□□□ 1.06
PTN-201ENST00000348225 DDX49Q9Y6V7 483 aaKnown RBP21.67■■□□□ 1.06
PTN-201ENST00000348225 MYH6P13533 1939 aa21.67■■□□□ 1.06
PTN-201ENST00000348225 AKR1B1P15121 316 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 GNAQP50148 359 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 KLHL40Q2TBA0 621 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 MYOZ2Q9NPC6 264 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 CLRN2A0PK11 232 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 ZNF280AP59817 542 aaPredicted RBP21.66■■□□□ 1.06
PTN-201ENST00000348225 GRM4Q14833 912 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 CCDC82Q8N4S0 544 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 FAM151AQ8WW52 585 aa21.66■■□□□ 1.06
PTN-201ENST00000348225 GREB1LQ9C091 1923 aaPredicted RBP21.65■■□□□ 1.06
PTN-201ENST00000348225 IGKV6D-41A0A0C4DH26 115 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 TCP10L2B9ZVM9 353 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 PRPF3O43395 683 aaKnown RBP21.65■■□□□ 1.06
PTN-201ENST00000348225 FIBPO43427 364 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 PLEKHA8P1O95397 391 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 MBD3O95983 291 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 PRELPP51888 382 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 ARHGAP27Q6ZUM4 889 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 USP48Q86UV5 1035 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 METTL16Q86W50 562 aaKnown RBP21.65■■□□□ 1.06
PTN-201ENST00000348225 CMTR1Q8N1G2 835 aaKnown RBP21.65■■□□□ 1.06
PTN-201ENST00000348225 DPF2Q92785 391 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 ZBED3Q96IU2 234 aaPredicted RBP21.65■■□□□ 1.06
PTN-201ENST00000348225 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.65■■□□□ 1.06
PTN-201ENST00000348225 MTMR4Q9NYA4 1195 aa21.65■■□□□ 1.06
PTN-201ENST00000348225 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
PTN-201ENST00000348225 DICER1Q9UPY3 1922 aaKnown RBP21.64■■□□□ 1.06
PTN-201ENST00000348225 FUT2Q10981 343 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 KRT40Q6A162 431 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 ATL3Q6DD88 541 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 BRAPQ7Z569 592 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 AIFM3Q96NN9 605 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 CSRNP1Q96S65 589 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 SCAND2PQ9GZW5 306 aaPredicted RBP21.64■■□□□ 1.05
PTN-201ENST00000348225 DNAJC18Q9H819 358 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 VEZTQ9HBM0 779 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 GDPD2Q9HCC8 539 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 CFAP45Q9UL16 551 aa21.64■■□□□ 1.05
PTN-201ENST00000348225 MPHOSPH10O00566 681 aaKnown RBP21.63■■□□□ 1.05
PTN-201ENST00000348225 XBP1P17861 261 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 LMNB1P20700 586 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 CERKLQ49MI3 558 aaPredicted RBP21.63■■□□□ 1.05
PTN-201ENST00000348225 OTUD7BQ6GQQ9 843 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 TATDN1Q6P1N9 297 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 FAM173BQ6P4H8 233 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 FAM83AQ86UY5 434 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 HERC5Q9UII4 1024 aaKnown RBP21.63■■□□□ 1.05
PTN-201ENST00000348225 GJA3Q9Y6H8 435 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 CNTNAP5Q8WYK1 1306 aa21.63■■□□□ 1.05
PTN-201ENST00000348225 WNT10BO00744 389 aa21.62■■□□□ 1.05
PTN-201ENST00000348225 TTLL1O95922 423 aa21.62■■□□□ 1.05
PTN-201ENST00000348225 GMPSP49915 693 aaPredicted RBP21.62■■□□□ 1.05
PTN-201ENST00000348225 ZNF396Q96N95 335 aaPredicted RBP21.62■■□□□ 1.05
PTN-201ENST00000348225 LZTS2Q9BRK4 669 aa21.62■■□□□ 1.05
PTN-201ENST00000348225 GUCY1A2P33402 732 aa21.62■■□□□ 1.05
PTN-201ENST00000348225 KIF23Q02241 960 aaPredicted RBP21.62■■□□□ 1.05
PTN-201ENST00000348225 SAFBQ15424 915 aaKnown RBP eCLIP21.62■■□□□ 1.05
PTN-201ENST00000348225 SRBD1Q8N5C6 995 aaKnown RBP21.62■■□□□ 1.05
PTN-201ENST00000348225 ELP1O95163 1332 aa21.61■■□□□ 1.05
PTN-201ENST00000348225 TNNI2P48788 182 aa21.61■■□□□ 1.05
PTN-201ENST00000348225 CNTNAP1P78357 1384 aa21.61■■□□□ 1.05
PTN-201ENST00000348225 GNL2Q13823 731 aaKnown RBP21.61■■□□□ 1.05
PTN-201ENST00000348225 MICALL2Q8IY33 904 aa21.61■■□□□ 1.05
PTN-201ENST00000348225 SYT17Q9BSW7 474 aa21.61■■□□□ 1.05
PTN-201ENST00000348225 GJB4Q9NTQ9 266 aa21.61■■□□□ 1.05
PTN-201ENST00000348225 MAD2L2Q9UI95 211 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms