RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CCDC144BQ3MJ40 725 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 TTC31Q49AM3 519 aaPredicted RBP16.56■□□□□ 0.24
NUP50-201ENST00000347635 SPATA31A6Q5VVP1 1343 aa16.56■□□□□ 0.24
NUP50-201ENST00000347635 ATG3Q9NT62 314 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 MAPK8IP1Q9UQF2 711 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 KRT9P35527 623 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 ZNF827Q17R98 1081 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 JAKMIP2Q96AA8 810 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 EBAG9O00559 213 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 FBXO38Q6PIJ6 1188 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 IL25Q9H293 177 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 PCDHA5Q9Y5H7 936 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 DCCP43146 1447 aa16.55■□□□□ 0.24
NUP50-201ENST00000347635 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 PICALMQ13492 652 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 PIGBQ92521 554 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
NUP50-201ENST00000347635 ATP8B1O43520 1251 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 GTF2A1P52655 376 aaPredicted RBP16.54■□□□□ 0.24
NUP50-201ENST00000347635 WHAMMP3Q1A5X7 153 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 LONRF3Q496Y0 759 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.54■□□□□ 0.24
NUP50-201ENST00000347635 GOLGA8FQ08AF8 430 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 GOLGA8DPQ0D2H9 430 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 TBC1D8BQ0IIM8 1120 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 TCERG1LQ5VWI1 586 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 CNKSR1Q969H4 720 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 NOC4LQ9BVI4 516 aaKnown RBP16.54■□□□□ 0.24
NUP50-201ENST00000347635 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
NUP50-201ENST00000347635 KIF20BQ96Q89 1820 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 ADORA1P30542 326 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 TEX11Q8IYF3 940 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 NEK11Q8NG66 645 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 RFX7Q2KHR2 1363 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 BTBD18B2RXH4 712 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 PPP1R2P41236 205 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 IFNL3Q8IZI9 196 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
NUP50-201ENST00000347635 BLZF1Q9H2G9 400 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 DDX41Q9UJV9 622 aaKnown RBP16.53■□□□□ 0.24
NUP50-201ENST00000347635 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 CYP27B1O15528 508 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 PDE6AP16499 860 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 ZSCAN26Q16670 478 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 RABGGTAQ92696 567 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 IGKV5-2P06315 115 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 VAV2P52735 878 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 NUP58Q9BVL2 599 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 CCDC113Q9H0I3 377 aa16.53■□□□□ 0.24
NUP50-201ENST00000347635 SEC31AO94979 1220 aaKnown RBP16.52■□□□□ 0.24
NUP50-201ENST00000347635 CLCN6P51797 869 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 CLEC4GQ6UXB4 293 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 VSTM4Q8IW00 320 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 DYDC1Q8WWB3 177 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.24
NUP50-201ENST00000347635 MNAT1P51948 309 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 AXIN2Q9Y2T1 843 aa16.52■□□□□ 0.24
NUP50-201ENST00000347635 SPATA1Q5VX52 437 aa16.52■□□□□ 0.23
NUP50-201ENST00000347635 CSGALNACT2Q8N6G5 542 aa16.52■□□□□ 0.23
NUP50-201ENST00000347635 STAMQ92783 540 aa16.52■□□□□ 0.23
NUP50-201ENST00000347635 PALLDQ8WX93 1383 aa16.52■□□□□ 0.23
NUP50-201ENST00000347635 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.23
NUP50-201ENST00000347635 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.23
NUP50-201ENST00000347635 DHX40Q8IX18 779 aaKnown RBP16.52■□□□□ 0.23
NUP50-201ENST00000347635 CMTR1Q8N1G2 835 aaKnown RBP16.52■□□□□ 0.23
NUP50-201ENST00000347635 SPAG5Q96R06 1193 aa16.52■□□□□ 0.23
NUP50-201ENST00000347635 BPIFA3Q9BQP9 254 aa16.52■□□□□ 0.23
NUP50-201ENST00000347635 PDE4DQ08499 809 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 RRP36Q96EU6 259 aaKnown RBP16.51■□□□□ 0.23
NUP50-201ENST00000347635 USP27XA6NNY8 438 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 PPARAQ07869 468 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 UBE3CQ15386 1083 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 SECISBP2LQ93073 1101 aaKnown RBP16.51■□□□□ 0.23
NUP50-201ENST00000347635 SELENOOQ9BVL4 669 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 PRDM1O75626 825 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 PPP4R3AQ6IN85 833 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 AFF2P51816 1311 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 TICAM2Q86XR7 235 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 SMARCC2Q8TAQ2 1214 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.51■□□□□ 0.23
NUP50-201ENST00000347635 CD163L1Q9NR16 1453 aa16.51■□□□□ 0.23
NUP50-201ENST00000347635 GCOM1H8Y6P7 765 aaPredicted RBP16.5■□□□□ 0.23
NUP50-201ENST00000347635 MYZAPP0CAP1 466 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 GNA11P29992 359 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms