RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 LRRC47Q8N1G4 583 aaKnown RBP8.62□□□□□ -1.03
GDNF-202ENST00000344622 FBXL16Q8N461 479 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 FAM151AQ8WW52 585 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 CLMNQ96JQ2 1002 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 ZSCAN10Q96SZ4 725 aaPredicted RBP8.62□□□□□ -1.03
GDNF-202ENST00000344622 NUP88Q99567 741 aaPredicted RBP8.62□□□□□ -1.03
GDNF-202ENST00000344622 TOMM22Q9NS69 142 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 LCTP09848 1927 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 RPS12P25398 132 aaKnown RBP8.62□□□□□ -1.03
GDNF-202ENST00000344622 BECN1Q14457 450 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 OTUD7BQ6GQQ9 843 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
GDNF-202ENST00000344622 TNRC18O15417 2968 aaPredicted RBP8.62□□□□□ -1.03
GDNF-202ENST00000344622 LDHCP07864 332 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 MICU3Q86XE3 530 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 DDX11Q96FC9 970 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 TMEM47Q9BQJ4 181 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 COL2A1P02458 1487 aaPredicted RBP8.61□□□□□ -1.03
GDNF-202ENST00000344622 GH2P01242 217 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 CST9Q5W186 159 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 GTF3C6Q969F1 213 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 ALDH8A1Q9H2A2 487 aaPredicted RBP8.61□□□□□ -1.03
GDNF-202ENST00000344622 MAD2L2Q9UI95 211 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 KLF18A0A0U1RQI7 1052 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 USP2O75604 605 aaPredicted RBP8.61□□□□□ -1.03
GDNF-202ENST00000344622 MCM5P33992 734 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 TTBK2Q6IQ55 1244 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 ZSCAN29Q8IWY8 852 aaPredicted RBP8.61□□□□□ -1.03
GDNF-202ENST00000344622 NSUN7Q8NE18 718 aaKnown RBP8.61□□□□□ -1.03
GDNF-202ENST00000344622 MTMR4Q9NYA4 1195 aa8.61□□□□□ -1.03
GDNF-202ENST00000344622 ANGEL1Q9UNK9 670 aaKnown RBP8.61□□□□□ -1.03
GDNF-202ENST00000344622 WNT7AO00755 349 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 SNAP25P60880 206 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 EAPPQ56P03 285 aaPredicted RBP8.6□□□□□ -1.03
GDNF-202ENST00000344622 FAM173BQ6P4H8 233 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.6□□□□□ -1.03
GDNF-202ENST00000344622 SGMS1Q86VZ5 419 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 SRBD1Q8N5C6 995 aaKnown RBP8.6□□□□□ -1.03
GDNF-202ENST00000344622 NACAP1Q9BZK3 213 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 ADARB2Q9NS39 739 aaKnown RBP8.6□□□□□ -1.03
GDNF-202ENST00000344622 PI4KBQ9UBF8 816 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 PPP1R11O60927 126 aaPredicted RBP8.6□□□□□ -1.03
GDNF-202ENST00000344622 ENTPD3O75355 529 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 LRRFIP1Q32MZ4 808 aaKnown RBP8.6□□□□□ -1.03
GDNF-202ENST00000344622 USP48Q86UV5 1035 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 SPICE1Q8N0Z3 855 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 CTNNA3Q9UI47 895 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 LIMCH1Q9UPQ0 1083 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 ZSWIM8A7E2V4 1837 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 PLIN4Q96Q06 1357 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 TRPM7Q96QT4 1865 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 CHD7Q9P2D1 2997 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 USP34Q70CQ2 3546 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 EEF2P13639 858 aaKnown RBP8.6□□□□□ -1.03
GDNF-202ENST00000344622 GJA5P36382 358 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 PKN1Q16512 942 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 FAM83AQ86UY5 434 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 EHD4Q9H223 541 aa8.6□□□□□ -1.03
GDNF-202ENST00000344622 TSPY2A6NKD2 308 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 IFIT3O14879 490 aaKnown RBP8.59□□□□□ -1.03
GDNF-202ENST00000344622 NPM3O75607 178 aaKnown RBP8.59□□□□□ -1.03
GDNF-202ENST00000344622 FOSBP53539 338 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 NPY5RQ15761 445 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 EARS2Q5JPH6 523 aaKnown RBP8.59□□□□□ -1.03
GDNF-202ENST00000344622 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 STX8Q9UNK0 236 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 DOCK3Q8IZD9 2030 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 ITGBL1O95965 494 aaPredicted RBP8.59□□□□□ -1.03
GDNF-202ENST00000344622 NEDD1Q8NHV4 660 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 KLRG1Q96E93 195 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 P2RX7Q99572 595 aaKnown RBP8.59□□□□□ -1.03
GDNF-202ENST00000344622 FRMPD2Q68DX3 1309 aaPredicted RBP8.59□□□□□ -1.03
GDNF-202ENST00000344622 GRIN3BO60391 1043 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 PFKFB2O60825 505 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 PIBF1Q8WXW3 757 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 MKNK2Q9HBH9 465 aa8.59□□□□□ -1.03
GDNF-202ENST00000344622 H7C1D1 291 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 TSPY3P0CV98 308 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 TSPY8P0CW00 308 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 SLC16A2P36021 539 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 RAB3GAP1Q15042 981 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 ZYXQ15942 572 aaKnown RBP8.58□□□□□ -1.04
GDNF-202ENST00000344622 KCTD1Q719H9 257 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 ZNF654Q8IZM8 581 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 FTOQ9C0B1 505 aaKnown RBP eCLIP8.58□□□□□ -1.04
GDNF-202ENST00000344622 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.58□□□□□ -1.04
GDNF-202ENST00000344622 HDAC9Q9UKV0 1011 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 KIF3CO14782 793 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 PLCG2P16885 1265 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 MCCP23508 829 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 CAP2P40123 477 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 LIFRP42702 1097 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 CERKLQ49MI3 558 aaPredicted RBP8.58□□□□□ -1.04
GDNF-202ENST00000344622 CDC37L1Q7L3B6 337 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms