RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 ATP6V1E1P36543 226 aa13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 UBXN2AP68543 259 aa13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 RBBP5Q15291 538 aaKnown RBP13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 PUM3Q15397 648 aaKnown RBP13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 SCYL1Q96KG9 808 aa13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 FTOQ9C0B1 505 aaKnown RBP eCLIP13.58□□□□□ -0.23
TRIOBP-202ENST00000344404 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 TBC1D8O95759 1140 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 ARID4AP29374 1257 aaPredicted RBP13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 FBXW4P57775 412 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 ATP11AP98196 1134 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 OTUD7BQ6GQQ9 843 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 SRGAP1Q7Z6B7 1085 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 RAB3IPQ96QF0 476 aaPredicted RBP13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 ESYT1Q9BSJ8 1104 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 RBM28Q9NW13 759 aaKnown RBP13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 BNIP3LO60238 219 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 KRT81Q14533 505 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 THRAP3Q9Y2W1 955 aaKnown RBP13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 INPP1P49441 399 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 SYT10Q6XYQ8 523 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 CETN3O15182 167 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 ZNF365Q70YC5 407 aa13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 NCOA5Q9HCD5 579 aaKnown RBP13.58□□□□□ -0.24
TRIOBP-202ENST00000344404 PPFIBP2Q8ND30 876 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 GABPB2Q8TAK5 448 aaPredicted RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 RRP9O43818 475 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 XAGE2Q96GT9 111 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 POLR2DO15514 142 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 FLOT1O75955 427 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 PDE1AP54750 535 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 AK2P54819 239 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 PDCD7Q8N8D1 485 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 CSRNP2Q9H175 543 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 ASIC3Q9UHC3 531 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 KIAA0586Q9BVV6 1533 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 CYP2J2P51589 502 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 ZNF790Q6PG37 636 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 PHKBQ93100 1093 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 TRIM56Q9BRZ2 755 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 C14orf93Q9H972 538 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 PCK1P35558 622 aa13.57□□□□□ -0.24
TRIOBP-202ENST00000344404 HACE1Q8IYU2 909 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 GSTA1P08263 222 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 GSTA2P09210 222 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 CALCRLQ16602 461 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 HP1BP3Q5SSJ5 553 aaPredicted RBP13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 VCX3BQ9H321 246 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 EXOC3O60645 756 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 SMIM24O75264 130 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 AS3MTQ9HBK9 375 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 SNX29Q8TEQ0 813 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 TEKT1Q969V4 418 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 METTL14Q9HCE5 456 aaKnown RBP13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 RTEL1Q9NZ71 1219 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 HOOK2Q96ED9 719 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 EXOC7Q9UPT5 735 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 CUL7Q14999 1698 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 GYG1P46976 350 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 KLHL7Q8IXQ5 586 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 TSPYL6Q8N831 410 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 CCDC26Q8TAB7 109 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
TRIOBP-202ENST00000344404 ERFEQ4G0M1 354 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 BLZF1Q9H2G9 400 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 MARK3P27448 753 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 TBC1D8BQ0IIM8 1120 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 HERC4Q5GLZ8 1057 aaPredicted RBP13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 MRPL46Q9H2W6 279 aaKnown RBP13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 ABCC11Q96J66 1382 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 ACBD5Q5T8D3 534 aaPredicted RBP13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 KAZNQ674X7 775 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 NLRX1Q86UT6 975 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 CTTNBP2NLQ9P2B4 639 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 PAXBP1Q9Y5B6 917 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 NME8Q8N427 588 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 DEPTORQ8TB45 409 aa13.55□□□□□ -0.24
TRIOBP-202ENST00000344404 TNNQ9UQP3 1299 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms