RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 FERMT3Q86UX7 667 aa25.62■■□□□ 1.69
CACNB1-201ENST00000344140 PNMA1Q8ND90 353 aa25.62■■□□□ 1.69
CACNB1-201ENST00000344140 SLC26A6Q9BXS9 759 aa25.62■■□□□ 1.69
CACNB1-201ENST00000344140 STX8Q9UNK0 236 aa25.62■■□□□ 1.69
CACNB1-201ENST00000344140 MYO1BO43795 1136 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 TRAK2O60296 914 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 KIF5BP33176 963 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 SHMT1P34896 483 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 PRELPP51888 382 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 FBXO18Q8NFZ0 1043 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 CCDC17Q96LX7 622 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 ALG1Q9BT22 464 aa25.61■■□□□ 1.69
CACNB1-201ENST00000344140 SBF1O95248 1867 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 NOVP48745 357 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 ZNF280AP59817 542 aaPredicted RBP25.6■■□□□ 1.69
CACNB1-201ENST00000344140 SH3BP5LQ7L8J4 393 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 DPF2Q92785 391 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 ZBED3Q96IU2 234 aaPredicted RBP25.6■■□□□ 1.69
CACNB1-201ENST00000344140 CHAMP1Q96JM3 812 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 TRIM34Q9BYJ4 488 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 RESTQ13127 1097 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 NBPF11Q86T75 865 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 RNF26Q9BY78 433 aaPredicted RBP25.6■■□□□ 1.69
CACNB1-201ENST00000344140 MYOZ2Q9NPC6 264 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 LMBRD1Q9NUN5 540 aa25.6■■□□□ 1.69
CACNB1-201ENST00000344140 FOSBP53539 338 aa25.59■■□□□ 1.69
CACNB1-201ENST00000344140 PPP4R3BQ5MIZ7 849 aa25.59■■□□□ 1.69
CACNB1-201ENST00000344140 METTL16Q86W50 562 aaKnown RBP25.59■■□□□ 1.69
CACNB1-201ENST00000344140 CEP95Q96GE4 821 aa25.59■■□□□ 1.69
CACNB1-201ENST00000344140 TMEM47Q9BQJ4 181 aa25.59■■□□□ 1.69
CACNB1-201ENST00000344140 PRPF40AO75400 957 aaKnown RBP25.58■■□□□ 1.69
CACNB1-201ENST00000344140 DEXIO95424 95 aa25.58■■□□□ 1.69
CACNB1-201ENST00000344140 TOP1P11387 765 aaKnown RBP25.58■■□□□ 1.69
CACNB1-201ENST00000344140 CSPP1Q1MSJ5 1256 aa25.58■■□□□ 1.69
CACNB1-201ENST00000344140 TMTC3Q6ZXV5 915 aa25.58■■□□□ 1.69
CACNB1-201ENST00000344140 RNF181Q9P0P0 153 aa25.58■■□□□ 1.69
CACNB1-201ENST00000344140 DICER1Q9UPY3 1922 aaKnown RBP25.58■■□□□ 1.69
CACNB1-201ENST00000344140 CLRN2A0PK11 232 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 AKR1B1P15121 316 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 AKAP17AQ02040 695 aaKnown RBP25.57■■□□□ 1.68
CACNB1-201ENST00000344140 TMEM87AQ8NBN3 555 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 FAM151AQ8WW52 585 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.57■■□□□ 1.68
CACNB1-201ENST00000344140 IGKV6D-41A0A0C4DH26 115 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 TCP10L2B9ZVM9 353 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 KRT85P78386 507 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 DNM1Q05193 864 aaKnown RBP25.57■■□□□ 1.68
CACNB1-201ENST00000344140 TRIM29Q14134 588 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 MTMR4Q9NYA4 1195 aa25.57■■□□□ 1.68
CACNB1-201ENST00000344140 NCLP19338 710 aaKnown RBP25.56■■□□□ 1.68
CACNB1-201ENST00000344140 GNAQP50148 359 aa25.56■■□□□ 1.68
CACNB1-201ENST00000344140 GUCY1B3Q02153 619 aa25.56■■□□□ 1.68
CACNB1-201ENST00000344140 FUT2Q10981 343 aa25.56■■□□□ 1.68
CACNB1-201ENST00000344140 FAM83AQ86UY5 434 aa25.56■■□□□ 1.68
CACNB1-201ENST00000344140 DNAJC18Q9H819 358 aa25.56■■□□□ 1.68
CACNB1-201ENST00000344140 CNPY2Q9Y2B0 182 aa25.56■■□□□ 1.68
CACNB1-201ENST00000344140 WNT10BO00744 389 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 GMPSP49915 693 aaPredicted RBP25.55■■□□□ 1.68
CACNB1-201ENST00000344140 GRM4Q14833 912 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 TATDN1Q6P1N9 297 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 CCDC82Q8N4S0 544 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 CSRNP1Q96S65 589 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 GJA3Q9Y6H8 435 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 PRPF3O43395 683 aaKnown RBP25.55■■□□□ 1.68
CACNB1-201ENST00000344140 C9orf131Q5VYM1 1079 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 CMTR1Q8N1G2 835 aaKnown RBP25.55■■□□□ 1.68
CACNB1-201ENST00000344140 VEZTQ9HBM0 779 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 HERC5Q9UII4 1024 aaKnown RBP25.55■■□□□ 1.68
CACNB1-201ENST00000344140 MYH8P13535 1937 aa25.55■■□□□ 1.68
CACNB1-201ENST00000344140 PLEKHA8P1O95397 391 aa25.54■■□□□ 1.68
CACNB1-201ENST00000344140 CERKLQ49MI3 558 aaPredicted RBP25.54■■□□□ 1.68
CACNB1-201ENST00000344140 AIFM3Q96NN9 605 aa25.54■■□□□ 1.68
CACNB1-201ENST00000344140 SIPA1L1O43166 1804 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 TTLL1O95922 423 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 OTUD7BQ6GQQ9 843 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 RBM27Q9P2N5 1060 aaKnown RBP25.53■■□□□ 1.68
CACNB1-201ENST00000344140 KRT40Q6A162 431 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 ATL3Q6DD88 541 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 USP48Q86UV5 1035 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 MICALL2Q8IY33 904 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 LZTS2Q9BRK4 669 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 DDX49Q9Y6V7 483 aaKnown RBP25.53■■□□□ 1.68
CACNB1-201ENST00000344140 UTRNP46939 3433 aa25.53■■□□□ 1.68
CACNB1-201ENST00000344140 CNTNAP1P78357 1384 aa25.52■■□□□ 1.68
CACNB1-201ENST00000344140 MPHOSPH10O00566 681 aaKnown RBP25.52■■□□□ 1.68
CACNB1-201ENST00000344140 KLHL40Q2TBA0 621 aa25.52■■□□□ 1.68
CACNB1-201ENST00000344140 NBPF9Q3BBW0 867 aa25.52■■□□□ 1.68
CACNB1-201ENST00000344140 BRAPQ7Z569 592 aa25.52■■□□□ 1.68
CACNB1-201ENST00000344140 SRBD1Q8N5C6 995 aaKnown RBP25.52■■□□□ 1.68
CACNB1-201ENST00000344140 SCAND2PQ9GZW5 306 aaPredicted RBP25.52■■□□□ 1.68
CACNB1-201ENST00000344140 CNOT7Q9UIV1 285 aaKnown RBP25.52■■□□□ 1.68
CACNB1-201ENST00000344140 ZNF541Q9H0D2 1346 aa25.52■■□□□ 1.68
CACNB1-201ENST00000344140 FIBPO43427 364 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 GUCY1A2P33402 732 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 TNNI2P48788 182 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 FAM173BQ6P4H8 233 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 GDPD2Q9HCC8 539 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 CFAP45Q9UL16 551 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 CNTNAP5Q8WYK1 1306 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 SHTN1A0MZ66 631 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms