RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 MYH1P12882 1939 aa21.64■■□□□ 1.05
USF2-202ENST00000343550 SIPA1L1O43166 1804 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 ATAD5Q96QE3 1844 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 C19orf81C9J6K1 198 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 GDF11O95390 407 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 INHAP05111 366 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 PLCD1P51178 756 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 U2AF1L4Q8WU68 220 aaKnown RBP21.63■■□□□ 1.05
USF2-202ENST00000343550 MCM9Q9NXL9 1143 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 TAOK2Q9UL54 1235 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 SLC4A4Q9Y6R1 1079 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 LOC285556D6RIA3 1793 aa21.63■■□□□ 1.05
USF2-202ENST00000343550 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
USF2-202ENST00000343550 HOXA7P31268 230 aaPredicted RBP21.62■■□□□ 1.05
USF2-202ENST00000343550 UBE2Q1Q7Z7E8 422 aa21.62■■□□□ 1.05
USF2-202ENST00000343550 ZBTB21Q9ULJ3 1066 aa21.62■■□□□ 1.05
USF2-202ENST00000343550 USP17L10C9JJH3 530 aa21.61■■□□□ 1.05
USF2-202ENST00000343550 H0YGN5 161 aa21.61■■□□□ 1.05
USF2-202ENST00000343550 SGPL1O95470 568 aa21.61■■□□□ 1.05
USF2-202ENST00000343550 IRX3P78415 501 aaPredicted RBP21.61■■□□□ 1.05
USF2-202ENST00000343550 ZMYM1Q5SVZ6 1142 aa21.61■■□□□ 1.05
USF2-202ENST00000343550 DPF3Q92784 378 aa21.61■■□□□ 1.05
USF2-202ENST00000343550 SEC62Q99442 399 aaKnown RBP21.61■■□□□ 1.05
USF2-202ENST00000343550 EHD4Q9H223 541 aa21.61■■□□□ 1.05
USF2-202ENST00000343550 SERPINB13Q9UIV8 391 aa21.61■■□□□ 1.05
USF2-202ENST00000343550 TRIM6-TRIM34B2RNG4 842 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 M0R2C6 588 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 CENPBP07199 599 aaPredicted RBP21.6■■□□□ 1.05
USF2-202ENST00000343550 TICAM2Q86XR7 235 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 MORF4L1Q9UBU8 362 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 GPAA1O43292 621 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 TATDN1Q6P1N9 297 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 RILPL2Q969X0 211 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 P2RX7Q99572 595 aaKnown RBP21.6■■□□□ 1.05
USF2-202ENST00000343550 GJD2Q9UKL4 321 aa21.6■■□□□ 1.05
USF2-202ENST00000343550 COLQQ9Y215 455 aaPredicted RBP21.6■■□□□ 1.05
USF2-202ENST00000343550 GSG1L2A8MUP6 293 aa21.59■■□□□ 1.05
USF2-202ENST00000343550 EVX2Q03828 476 aa21.59■■□□□ 1.05
USF2-202ENST00000343550 USP17L12C9JPN9 530 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 USP17L21D6R901 530 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 GH2P01242 217 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 TFRCP02786 760 aaKnown RBP21.58■■□□□ 1.04
USF2-202ENST00000343550 CYP2D6P10635 497 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 GABPAQ06546 454 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 DEFB118Q96PH6 123 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 HTATIP2Q9BUP3 242 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 PAK6Q9NQU5 681 aaPredicted RBP21.58■■□□□ 1.04
USF2-202ENST00000343550 EMILIN3Q9NT22 766 aa21.58■■□□□ 1.04
USF2-202ENST00000343550 FARP2O94887 1054 aaPredicted RBP21.57■■□□□ 1.04
USF2-202ENST00000343550 CAPN2P17655 700 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 GNAT2P19087 354 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 HERVK_113P62684 666 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 C12orf60Q5U649 245 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 GIMAP6Q6P9H5 292 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 CTR9Q6PD62 1173 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 GPRC5AQ8NFJ5 357 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 DDRGK1Q96HY6 314 aa21.57■■□□□ 1.04
USF2-202ENST00000343550 PATL2C9JE40 543 aaKnown RBP21.56■■□□□ 1.04
USF2-202ENST00000343550 USP17L2Q6R6M4 530 aa21.56■■□□□ 1.04
USF2-202ENST00000343550 TXNRD2Q9NNW7 524 aa21.56■■□□□ 1.04
USF2-202ENST00000343550 DOCK3Q8IZD9 2030 aa21.56■■□□□ 1.04
USF2-202ENST00000343550 DDX60LQ5H9U9 1706 aaKnown RBP21.56■■□□□ 1.04
USF2-202ENST00000343550 NAV1Q8NEY1 1877 aa21.56■■□□□ 1.04
USF2-202ENST00000343550 CYP2D7A0A087X1C5 515 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 PEX10O60683 326 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 NEFLP07196 543 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 SHMT1P34896 483 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 CENPQQ7L2Z9 268 aaPredicted RBP21.55■■□□□ 1.04
USF2-202ENST00000343550 HELLSQ9NRZ9 838 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 RBPJLQ9UBG7 517 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 BAZ2AQ9UIF9 1905 aaKnown RBP21.55■■□□□ 1.04
USF2-202ENST00000343550 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 HMGCRP04035 888 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 CERKLQ49MI3 558 aaPredicted RBP21.55■■□□□ 1.04
USF2-202ENST00000343550 CRISPLD2Q9H0B8 497 aa21.55■■□□□ 1.04
USF2-202ENST00000343550 APPP05067 770 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 SDSP20132 328 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 RAB3GAP1Q15042 981 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 SBK1Q52WX2 424 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 CCDC129Q6ZRS4 1044 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 AMOTL1Q8IY63 956 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 DYNLL2Q96FJ2 89 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 FAM227BQ96M60 508 aa21.54■■□□□ 1.04
USF2-202ENST00000343550 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.54■■□□□ 1.044e-6■■■■□ 23.5
USF2-202ENST00000343550 FXR1P51114 621 aaKnown RBP eCLIP21.53■■□□□ 1.04
USF2-202ENST00000343550 ABCB5Q2M3G0 1257 aa21.53■■□□□ 1.04
USF2-202ENST00000343550 Q3C1V9 767 aa21.53■■□□□ 1.04
USF2-202ENST00000343550 TTC22Q5TAA0 569 aa21.53■■□□□ 1.04
USF2-202ENST00000343550 IFNL3Q8IZI9 196 aa21.53■■□□□ 1.04
USF2-202ENST00000343550 GTF3C2Q8WUA4 911 aaPredicted RBP21.53■■□□□ 1.04
USF2-202ENST00000343550 FEZ1Q99689 392 aa21.53■■□□□ 1.04
USF2-202ENST00000343550 EPB41L4AQ9HCS5 686 aaPredicted RBP21.53■■□□□ 1.04
USF2-202ENST00000343550 MAPK4P31152 587 aa21.52■■□□□ 1.04
USF2-202ENST00000343550 ZYXQ15942 572 aaKnown RBP21.52■■□□□ 1.04
USF2-202ENST00000343550 MCMDC2Q4G0Z9 681 aa21.52■■□□□ 1.04
USF2-202ENST00000343550 C12orf42Q96LP6 360 aa21.52■■□□□ 1.04
USF2-202ENST00000343550 NUDT12Q9BQG2 462 aa21.52■■□□□ 1.04
USF2-202ENST00000343550 CABP5Q9NP86 173 aa21.52■■□□□ 1.04
USF2-202ENST00000343550 ARPP21Q9UBL0 812 aaPredicted RBP21.52■■□□□ 1.04
USF2-202ENST00000343550 SWAP70Q9UH65 585 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms