RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 ESR2Q92731 530 aa24.47■■□□□ 1.51
DUSP28-201ENST00000343217 EVCP57679 992 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 PDE4BQ07343 736 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 CDC42EP5Q6NZY7 148 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 CHST3Q7LGC8 479 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 ZNF274Q96GC6 653 aaPredicted RBP24.46■■□□□ 1.51
DUSP28-201ENST00000343217 TOMM22Q9NS69 142 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 DDX60LQ5H9U9 1706 aaKnown RBP24.46■■□□□ 1.51
DUSP28-201ENST00000343217 FLT1P17948 1338 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 ROBO3Q96MS0 1386 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 FKTNO75072 461 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 KDM4AO75164 1064 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 LARGE1O95461 756 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 SART3Q15020 963 aaKnown RBP24.46■■□□□ 1.51
DUSP28-201ENST00000343217 MAPKAPK5Q8IW41 473 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 HOOK2Q96ED9 719 aa24.46■■□□□ 1.51
DUSP28-201ENST00000343217 CYP2D7A0A087X1C5 515 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 ORC4O43929 436 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 PKN2Q16513 984 aaKnown RBP24.45■■□□□ 1.5
DUSP28-201ENST00000343217 CYB5R4Q7L1T6 521 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 FAM151AQ8WW52 585 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 CNKSR2Q8WXI2 1034 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 MS4A4AQ96JQ5 239 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 PTPN18Q99952 460 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 USP40Q9NVE5 1235 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 ZSWIM5Q9P217 1185 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 CSADQ9Y600 493 aa24.45■■□□□ 1.5
DUSP28-201ENST00000343217 MYH1P12882 1939 aa24.44■■□□□ 1.5
DUSP28-201ENST00000343217 POLR3DP05423 398 aaPredicted RBP24.44■■□□□ 1.5
DUSP28-201ENST00000343217 RRP12Q5JTH9 1297 aaKnown RBP24.44■■□□□ 1.5
DUSP28-201ENST00000343217 ZNF287Q9HBT7 754 aa24.44■■□□□ 1.5
DUSP28-201ENST00000343217 TACC3Q9Y6A5 838 aa24.44■■□□□ 1.5
DUSP28-201ENST00000343217 CCDC83Q8IWF9 413 aa24.43■■□□□ 1.5
DUSP28-201ENST00000343217 INCENPQ9NQS7 918 aa24.43■■□□□ 1.5
DUSP28-201ENST00000343217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.43■■□□□ 1.5
DUSP28-201ENST00000343217 SH2B2O14492 632 aaPredicted RBP24.42■■□□□ 1.5
DUSP28-201ENST00000343217 PFKFB2O60825 505 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 LIFRP42702 1097 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 NUCB2P80303 420 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 APOBRQ0VD83 1088 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 NFIAQ12857 509 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 OTUD7BQ6GQQ9 843 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 GTF3C6Q969F1 213 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 SNCAIPQ9Y6H5 919 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 ERICH2A1L162 156 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 SPDYE5A6NIY4 337 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 NPM3O75607 178 aaKnown RBP24.42■■□□□ 1.5
DUSP28-201ENST00000343217 WDHD1O75717 1129 aaPredicted RBP24.42■■□□□ 1.5
DUSP28-201ENST00000343217 DCAF15Q66K64 600 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 IGDCC4Q8TDY8 1250 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 WRNIP1Q96S55 665 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 FAM198AQ9UFP1 575 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 SMC3Q9UQE7 1217 aa24.42■■□□□ 1.5
DUSP28-201ENST00000343217 CYP2D6P10635 497 aa24.41■■□□□ 1.5
DUSP28-201ENST00000343217 SGMS1Q86VZ5 419 aa24.41■■□□□ 1.5
DUSP28-201ENST00000343217 TMTC2Q8N394 836 aa24.41■■□□□ 1.5
DUSP28-201ENST00000343217 IFIT3O14879 490 aaKnown RBP24.4■■□□□ 1.5
DUSP28-201ENST00000343217 TCP10Q12799 353 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 TMEM67Q5HYA8 995 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 TTC6Q86TZ1 520 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 IQCA1Q86XH1 822 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 STK11IPQ8N1F8 1099 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 NECAB1Q8N987 351 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 BRI3BPQ8WY22 251 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 OTUD5Q96G74 571 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 UBAC1Q9BSL1 405 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 HPS5Q9UPZ3 1129 aa24.4■■□□□ 1.5
DUSP28-201ENST00000343217 PDIA3P30101 505 aaKnown RBP24.39■■□□□ 1.5
DUSP28-201ENST00000343217 GTF2A2P52657 109 aa24.39■■□□□ 1.5
DUSP28-201ENST00000343217 CRHR2Q13324 411 aa24.39■■□□□ 1.5
DUSP28-201ENST00000343217 ERO1BQ86YB8 467 aa24.39■■□□□ 1.5
DUSP28-201ENST00000343217 ZKSCAN4Q969J2 545 aaPredicted RBP24.39■■□□□ 1.5
DUSP28-201ENST00000343217 IDI2Q9BXS1 227 aa24.39■■□□□ 1.5
DUSP28-201ENST00000343217 ZNF341Q9BYN7 854 aa24.39■■□□□ 1.5
DUSP28-201ENST00000343217 KLF18A0A0U1RQI7 1052 aa24.38■■□□□ 1.49
DUSP28-201ENST00000343217 SMIM22K7EJ46 135 aa24.38■■□□□ 1.49
DUSP28-201ENST00000343217 RANBP6O60518 1105 aaKnown RBP24.38■■□□□ 1.49
DUSP28-201ENST00000343217 PDIA4P13667 645 aaKnown RBP24.38■■□□□ 1.49
DUSP28-201ENST00000343217 ST3GAL1Q11201 340 aa24.38■■□□□ 1.49
DUSP28-201ENST00000343217 STK3Q13188 491 aa24.38■■□□□ 1.49
DUSP28-201ENST00000343217 MIGA2Q7L4E1 593 aa24.38■■□□□ 1.49
DUSP28-201ENST00000343217 NKX2-3Q8TAU0 364 aa24.38■■□□□ 1.49
DUSP28-201ENST00000343217 LLPHQ9BRT6 129 aaKnown RBP24.38■■□□□ 1.49
DUSP28-201ENST00000343217 SAP30BPQ9UHR5 308 aaKnown RBP24.38■■□□□ 1.49
DUSP28-201ENST00000343217 ZNF112Q9UJU3 913 aa24.38■■□□□ 1.49
DUSP28-201ENST00000343217 CCL15-CCL14A0A0B4J2E2 113 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 PICALMQ13492 652 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 CCL15Q16663 113 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 OSBPL5Q9H0X9 879 aaPredicted RBP24.37■■□□□ 1.49
DUSP28-201ENST00000343217 LY9Q9HBG7 655 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 GPHNQ9NQX3 736 aaPredicted RBP24.37■■□□□ 1.49
DUSP28-201ENST00000343217 DHX16O60231 1041 aaKnown RBP24.37■■□□□ 1.49
DUSP28-201ENST00000343217 PRDM1O75626 825 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 PLCD1P51178 756 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 MLLT1Q03111 559 aaPredicted RBP24.37■■□□□ 1.49
DUSP28-201ENST00000343217 SCRN1Q12765 414 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 WTAPQ15007 396 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 RAB3GAP1Q15042 981 aa24.37■■□□□ 1.49
DUSP28-201ENST00000343217 FBXO46Q6PJ61 603 aaPredicted RBP24.37■■□□□ 1.49
DUSP28-201ENST00000343217 C16orf86Q6ZW13 317 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms