RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 ABHD10Q9NUJ1 306 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 TAB2Q9NYJ8 693 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 RGPD2P0DJD1 1756 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 C1orf167Q5SNV9 1468 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 GOLGA6CA6NDK9 693 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 GOLGA8AA7E2F4 631 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 GOLGA6DP0CG33 693 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 TUBB2AQ13885 445 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 CCDC91Q7Z6B0 441 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 OXER1Q8TDS5 423 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 TUBB2BQ9BVA1 445 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 GOLGA6AQ9NYA3 693 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 MYH8P13535 1937 aa17.22■□□□□ 0.35
SNX18-202ENST00000343017 FAM205CA6NFA0 338 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 KRT9P35527 623 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 CNGA4Q8IV77 575 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
SNX18-202ENST00000343017 SELENOOQ9BVL4 669 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 ZBTB43O43298 467 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 ERCC5P28715 1186 aaPredicted RBP17.21■□□□□ 0.35
SNX18-202ENST00000343017 CUL4BQ13620 913 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 TMTC1Q8IUR5 882 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 VIPAS39Q9H9C1 493 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 CTNND2Q9UQB3 1225 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 NWD2Q9ULI1 1742 aa17.21■□□□□ 0.35
SNX18-202ENST00000343017 PDE2AO00408 941 aaPredicted RBP17.21■□□□□ 0.34
SNX18-202ENST00000343017 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.34
SNX18-202ENST00000343017 IBSPP21815 317 aaPredicted RBP17.21■□□□□ 0.34
SNX18-202ENST00000343017 PPARDQ03181 441 aa17.21■□□□□ 0.34
SNX18-202ENST00000343017 FILIP1LQ4L180 1135 aa17.21■□□□□ 0.34
SNX18-202ENST00000343017 SWT1Q5T5J6 900 aaKnown RBP17.21■□□□□ 0.34
SNX18-202ENST00000343017 TRAPPC11Q7Z392 1133 aa17.21■□□□□ 0.34
SNX18-202ENST00000343017 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.34
SNX18-202ENST00000343017 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.34
SNX18-202ENST00000343017 MAPK8IP1Q9UQF2 711 aa17.21■□□□□ 0.34
SNX18-202ENST00000343017 GNGT1P63211 74 aa17.2■□□□□ 0.34
SNX18-202ENST00000343017 KRT31Q15323 416 aa17.2■□□□□ 0.34
SNX18-202ENST00000343017 EZH2Q15910 746 aaKnown RBP17.2■□□□□ 0.34
SNX18-202ENST00000343017 CDKAL1Q5VV42 579 aa17.2■□□□□ 0.34
SNX18-202ENST00000343017 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
SNX18-202ENST00000343017 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
SNX18-202ENST00000343017 ZNF335Q9H4Z2 1342 aaPredicted RBP17.2■□□□□ 0.34
SNX18-202ENST00000343017 CPDO75976 1380 aa17.2■□□□□ 0.34
SNX18-202ENST00000343017 MYO1FO00160 1098 aa17.2■□□□□ 0.34
SNX18-202ENST00000343017 MAP2K2P36507 400 aa17.2■□□□□ 0.34
SNX18-202ENST00000343017 CDKL5O76039 1030 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 HDAC7Q8WUI4 952 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 CEP89Q96ST8 783 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 BLZF1Q9H2G9 400 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 CABP5Q9NP86 173 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
SNX18-202ENST00000343017 PPP1R3GB7ZBB8 358 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 TUBB4BP68371 445 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 C2orf54Q08AI8 447 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 CYP26C1Q6V0L0 522 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 EYA2O00167 538 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
SNX18-202ENST00000343017 GSCP56915 257 aaPredicted RBP17.19■□□□□ 0.34
SNX18-202ENST00000343017 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
SNX18-202ENST00000343017 ANKRD20A12PQ8NF67 263 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 ZKSCAN3Q9BRR0 538 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 CAPS2Q9BXY5 557 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
SNX18-202ENST00000343017 SAR1BQ9Y6B6 198 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 DUSP10Q9Y6W6 482 aa17.19■□□□□ 0.34
SNX18-202ENST00000343017 GOLGA6BA6NDN3 693 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 SHOX2O60902 331 aaPredicted RBP17.18■□□□□ 0.34
SNX18-202ENST00000343017 INPP5BP32019 993 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 CCNI2Q6ZMN8 369 aaPredicted RBP17.18■□□□□ 0.34
SNX18-202ENST00000343017 SPATA20Q8TB22 786 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 XAGE2Q96GT9 111 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 CAPN7Q9Y6W3 813 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 NDUFA10O95299 355 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
SNX18-202ENST00000343017 MMP14P50281 582 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 PPARAQ07869 468 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 TMEM67Q5HYA8 995 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 TRIML1Q8N9V2 468 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 CAGE1Q8TC20 777 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 PAGE5Q96GU1 130 aa17.18■□□□□ 0.34
SNX18-202ENST00000343017 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
SNX18-202ENST00000343017 PES1O00541 588 aaKnown RBP17.17■□□□□ 0.34
SNX18-202ENST00000343017 TUBBP07437 444 aa17.17■□□□□ 0.34
SNX18-202ENST00000343017 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
SNX18-202ENST00000343017 SND1Q7KZF4 910 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX18-202ENST00000343017 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
SNX18-202ENST00000343017 APPBP2Q92624 585 aa17.17■□□□□ 0.34
SNX18-202ENST00000343017 FAM212AQ96EL1 285 aa17.17■□□□□ 0.34
SNX18-202ENST00000343017 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
SNX18-202ENST00000343017 MAP9Q49MG5 647 aa17.17■□□□□ 0.34
SNX18-202ENST00000343017 MARF1Q9Y4F3 1742 aaKnown RBP17.17■□□□□ 0.34
SNX18-202ENST00000343017 GRIN2DO15399 1336 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 MMP1P03956 469 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNX18-202ENST00000343017 ARL8AQ96BM9 186 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 CEP126Q9P2H0 1117 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 hCG_1642624A0A1W2PR95 340 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 RCCD1A6NED2 376 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 SLC7A5Q01650 507 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms