RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TBC1D7Q9P0N9 293 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 TEX33O43247 280 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 SHC4Q6S5L8 630 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 ANKRD7Q92527 254 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 EBAG9O00559 213 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 ERLIN2O94905 339 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 PRR29P0C7W0 189 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 FDPSP14324 419 aaKnown RBP13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 FAM114A1Q8IWE2 563 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 RAB34Q9BZG1 259 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 SENP2Q9HC62 589 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 KCNJ18B7U540 433 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 HPDP32754 393 aaPredicted RBP13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 ADD2P35612 726 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 GTF2A1P52655 376 aaPredicted RBP13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 KCNJ12Q14500 433 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 TYW1BQ6NUM6 668 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 OXER1Q8TDS5 423 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 PLCD4Q9BRC7 762 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 FAN1Q9Y2M0 1017 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 MROH2AA6NES4 1674 aa13.96□□□□□ -0.17
SNRNP48-201ENST00000342415 SMIM23A6NLE4 172 aa13.96□□□□□ -0.18
SNRNP48-201ENST00000342415 H7C1W4 665 aa13.96□□□□□ -0.18
SNRNP48-201ENST00000342415 CALML3P27482 149 aa13.96□□□□□ -0.18
SNRNP48-201ENST00000342415 SPATA1Q5VX52 437 aa13.96□□□□□ -0.18
SNRNP48-201ENST00000342415 NCAPH2Q6IBW4 605 aa13.96□□□□□ -0.18
SNRNP48-201ENST00000342415 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.18
SNRNP48-201ENST00000342415 SH2B2O14492 632 aaPredicted RBP13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 LCORLQ8N3X6 602 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 PPP1R1BQ9UD71 204 aaPredicted RBP13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 ZBTB1Q9Y2K1 713 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 PLCD1P51178 756 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 MORC3Q14149 939 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 USP49Q70CQ1 688 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 FAM76AQ8TAV0 307 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 NBPF26B4DH59 902 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 PPP6R2O75170 966 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 NBPF10Q6P3W6 841 aaKnown RBP13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 NBPF15Q8N660 670 aa13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
SNRNP48-201ENST00000342415 KCNQ4P56696 695 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 DYNLL1P63167 89 aaKnown RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 HLFQ16534 295 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 OR8K1Q8NGG5 319 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 PYM1Q9BRP8 204 aaKnown RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 OSBPL5Q9H0X9 879 aaPredicted RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 MYO6Q9UM54 1294 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 ARAP3Q8WWN8 1544 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 TRAF5O00463 557 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 FGFR1OPO95684 399 aaKnown RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 TFAP4Q01664 338 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 INF2Q27J81 1249 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 SRGAP1Q7Z6B7 1085 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 C2CD5Q86YS7 1000 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 CERS3Q8IU89 383 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 CRACR2BQ8N4Y2 399 aaPredicted RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 RABGGTAQ92696 567 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 ZNF287Q9HBT7 754 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 SAR1BQ9Y6B6 198 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 ZC3H13Q5T200 1668 aaKnown RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 BAG3O95817 575 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 PCCAP05165 728 aaPredicted RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 CALM1P0DP23 149 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 CALM2P0DP24 149 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 CALM3P0DP25 149 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 CYP27A1Q02318 531 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 EPN1Q9Y6I3 576 aaPredicted RBP13.94□□□□□ -0.18
SNRNP48-201ENST00000342415 TLDC2A0PJX2 215 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 CTIFO43310 598 aaKnown RBP13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 SSR1P43307 286 aaKnown RBP13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 USP42Q9H9J4 1324 aaKnown RBP13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 GOLGA6CA6NDK9 693 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 MMP1P03956 469 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 GOLGA6DP0CG33 693 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 CXCR5P32302 372 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 RAPGEF1Q13905 1077 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 TSGA10IPQ3SY00 556 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 DYDC1Q8WWB3 177 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 NAA15Q9BXJ9 866 aaKnown RBP13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 GOLGA6AQ9NYA3 693 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 MORC2Q9Y6X9 1032 aaPredicted RBP13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 NEDD4P46934 1319 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 DDB1Q16531 1140 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 INO80Q9ULG1 1556 aaPredicted RBP13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 KIDINS220Q9ULH0 1771 aa13.93□□□□□ -0.18
SNRNP48-201ENST00000342415 PHLPP2Q6ZVD8 1323 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms