RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 COL2A1P02458 1487 aaPredicted RBP19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 IGKV6D-41A0A0C4DH26 115 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 KIF28PB7ZC32 967 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 CALM1P0DP23 149 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 CALM2P0DP24 149 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 CALM3P0DP25 149 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 CCDC178Q5BJE1 867 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 TMTC3Q6ZXV5 915 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 CCDC82Q8N4S0 544 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 AGBL3Q8NEM8 1001 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 SHISA4Q96DD7 197 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 TMEM47Q9BQJ4 181 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 EHD4Q9H223 541 aa19.96■□□□□ 0.79
FRMD4A-202ENST00000342409 AKR1B1P15121 316 aa19.95■□□□□ 0.78
FRMD4A-202ENST00000342409 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
FRMD4A-202ENST00000342409 KRT40Q6A162 431 aa19.95■□□□□ 0.78
FRMD4A-202ENST00000342409 PNMA1Q8ND90 353 aa19.95■□□□□ 0.78
FRMD4A-202ENST00000342409 TFIP11Q9UBB9 837 aaKnown RBP19.95■□□□□ 0.78
FRMD4A-202ENST00000342409 ATRNL1Q5VV63 1379 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 CNTNAP5Q8WYK1 1306 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 KRT85P78386 507 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 GSE1Q14687 1217 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 PKN1Q16512 942 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 CIAPIN1Q6FI81 312 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 SRBD1Q8N5C6 995 aaKnown RBP19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 CEP95Q96GE4 821 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 ZBED3Q96IU2 234 aaPredicted RBP19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 KAT14Q9H8E8 782 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 RBM28Q9NW13 759 aaKnown RBP19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 SWAP70Q9UH65 585 aa19.94■□□□□ 0.78
FRMD4A-202ENST00000342409 SHTN1A0MZ66 631 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 KIF23Q02241 960 aaPredicted RBP19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 ILDR2Q71H61 639 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 RNF26Q9BY78 433 aaPredicted RBP19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 SPON1Q9HCB6 807 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 ENTPD3O75355 529 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 DEXIO95424 95 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 HLA-DOAP06340 250 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 GRM4Q14833 912 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 SLC35G1Q2M3R5 365 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 RASGRP2Q7LDG7 609 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 MTMR14Q8NCE2 650 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 MAP3K14Q99558 947 aa19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 DHX36Q9H2U1 1008 aaKnown RBP19.93■□□□□ 0.78
FRMD4A-202ENST00000342409 FAM196BA6NMK8 535 aa19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 PRPF3O43395 683 aaKnown RBP19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 METTL16Q86W50 562 aaKnown RBP19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 TRIM22Q8IYM9 498 aa19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 STAG2Q8N3U4 1231 aa19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 LEO1Q8WVC0 666 aaPredicted RBP19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 JDP2Q8WYK2 163 aa19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 FTOQ9C0B1 505 aaKnown RBP eCLIP19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 RBM27Q9P2N5 1060 aaKnown RBP19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 ZNF70Q9UC06 446 aaPredicted RBP19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 HDAC9Q9UKV0 1011 aa19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 CNTNAP1P78357 1384 aa19.92■□□□□ 0.78
FRMD4A-202ENST00000342409 ELP1O95163 1332 aa19.91■□□□□ 0.78
FRMD4A-202ENST00000342409 DLGAP5Q15398 846 aa19.91■□□□□ 0.78
FRMD4A-202ENST00000342409 SPDYE2Q495Y8 402 aa19.91■□□□□ 0.78
FRMD4A-202ENST00000342409 CLEC10AQ8IUN9 316 aa19.91■□□□□ 0.78
FRMD4A-202ENST00000342409 CTCFLQ8NI51 663 aaPredicted RBP19.91■□□□□ 0.78
FRMD4A-202ENST00000342409 MAD2L2Q9UI95 211 aa19.91■□□□□ 0.78
FRMD4A-202ENST00000342409 STX8Q9UNK0 236 aa19.91■□□□□ 0.78
FRMD4A-202ENST00000342409 hCG_1642624A0A1W2PR95 340 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 CLRN2A0PK11 232 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 SHROOM1Q2M3G4 852 aaPredicted RBP19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 USP28Q96RU2 1077 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 MTMR4Q9NYA4 1195 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 PI4KBQ9UBF8 816 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 UTRNP46939 3433 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 MBD3O95983 291 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 OGFOD1Q8N543 542 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 WASF1Q92558 559 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 TMEM63CQ9P1W3 806 aa19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 V9GY48 417 aaPredicted RBP19.9■□□□□ 0.78
FRMD4A-202ENST00000342409 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
FRMD4A-202ENST00000342409 FZD9O00144 591 aa19.89■□□□□ 0.77
FRMD4A-202ENST00000342409 TOP1P11387 765 aaKnown RBP19.89■□□□□ 0.77
FRMD4A-202ENST00000342409 UBE2HP62256 183 aa19.89■□□□□ 0.77
FRMD4A-202ENST00000342409 CAVIN1Q6NZI2 390 aaKnown RBP19.89■□□□□ 0.77
FRMD4A-202ENST00000342409 SCAND2PQ9GZW5 306 aaPredicted RBP19.89■□□□□ 0.77
FRMD4A-202ENST00000342409 KCNJ14Q9UNX9 436 aa19.89■□□□□ 0.77
FRMD4A-202ENST00000342409 TCP10L2B9ZVM9 353 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 VEGFAP15692 232 aaPredicted RBP19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 U2AF2P26368 475 aaKnown RBP eCLIP19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 ZNF280AP59817 542 aaPredicted RBP19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 TATDN1Q6P1N9 297 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 BRAPQ7Z569 592 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 FHDC1Q9C0D6 1143 aaPredicted RBP19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 TAOK2Q9UL54 1235 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 ATAD5Q96QE3 1844 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 MMP1P03956 469 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 KIF5BP33176 963 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 TNIP1Q15025 636 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 MYSM1Q5VVJ2 828 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 FOXP4Q8IVH2 680 aaPredicted RBP19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 ZSCAN29Q8IWY8 852 aaPredicted RBP19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 PGBD1Q96JS3 809 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 SPATA32Q96LK8 384 aa19.88■□□□□ 0.77
FRMD4A-202ENST00000342409 RCOR1Q9UKL0 485 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms