RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 UBXN1Q04323 297 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 COA1Q9GZY4 146 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 SHTN1A0MZ66 631 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 KRT83P78385 493 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 ME3Q16798 604 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 NLRX1Q86UT6 975 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 SYNE4Q8N205 404 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 APBB1IPQ7Z5R6 666 aaPredicted RBP16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 ANKRD35Q8N283 1001 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 PSTPIP2Q9H939 334 aa16.9■□□□□ 0.3
PCDHB13-201ENST00000341948 POLR2DO15514 142 aaKnown RBP16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 TACC1O75410 805 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 PLVAPQ9BX97 442 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CLSTN2Q9H4D0 955 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 SERPINB13Q9UIV8 391 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CUTAO60888 179 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 PCP11498 1178 aaKnown RBP16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 ADD2P35612 726 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 GTF3C6Q969F1 213 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 MRPL11Q9Y3B7 192 aaKnown RBP16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CAMSAP1Q5T5Y3 1602 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CTAGE15A4D2H0 777 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CTAGE8P0CG41 777 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 DCAF17Q5H9S7 520 aaPredicted RBP16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CTAGE6Q86UF2 777 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 FBXO11Q86XK2 927 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CTAGE4Q8IX94 777 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 DNM3Q9UQ16 869 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 FRMD4BQ9Y2L6 1034 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 TRPM1Q7Z4N2 1603 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 TESPA1A2RU30 521 aaPredicted RBP16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
PCDHB13-201ENST00000341948 AGLP35573 1532 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 GCOM1H8Y6P7 765 aaPredicted RBP16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 POLR3GO15318 223 aaPredicted RBP16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 SASH1O94885 1247 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 MYZAPP0CAP1 466 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 PPP1R2P41236 205 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 KIF5AQ12840 1032 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 BIRC3Q13489 604 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 RASGRF1Q13972 1273 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 GLG1Q92896 1179 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 KRT86O43790 486 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 GNPTABQ3T906 1256 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 EPHA10Q5JZY3 1008 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 KIF22Q14807 665 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 ARHGEF16Q5VV41 709 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 NCAPG2Q86XI2 1143 aa16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 LUC7L2Q9Y383 392 aaKnown RBP16.88■□□□□ 0.29
PCDHB13-201ENST00000341948 E9PCH4 1651 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 BMS1Q14692 1282 aaKnown RBP16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 SPC25Q9HBM1 224 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 STK24Q9Y6E0 443 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 GOLGA6L10A0A0M3HER8 536 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 PRKAB2O43741 272 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 GAS7O60861 476 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 BRD1O95696 1058 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 RGS22Q8NE09 1264 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 MAP4K1Q92918 833 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 RBSNQ9H1K0 784 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 BCCIPQ9P287 314 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 MAPK8IP1Q9UQF2 711 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 CARMIL3Q8ND23 1372 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 GDF11O95390 407 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 STRN3Q13033 797 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 LCORLQ8N3X6 602 aa16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 SRRTQ9BXP5 876 aaKnown RBP16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
PCDHB13-201ENST00000341948 SNAP23O00161 211 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 KIAA0753Q2KHM9 967 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 BLIDQ8IZY5 108 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 CNGA4Q8IV77 575 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 CELF1Q92879 486 aaKnown RBP16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 RAD51AP2Q09MP3 1159 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 CTAGE9A4FU28 777 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 DNM2P50570 870 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 DHX36Q9H2U1 1008 aaKnown RBP16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 MINPP1Q9UNW1 487 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 PCDHA1Q9Y5I3 950 aa16.86■□□□□ 0.29
PCDHB13-201ENST00000341948 SPATA31A1Q5TZJ5 1347 aa16.85■□□□□ 0.29
PCDHB13-201ENST00000341948 M0R2C6 588 aa16.85■□□□□ 0.29
PCDHB13-201ENST00000341948 SCG2P13521 617 aa16.85■□□□□ 0.29
PCDHB13-201ENST00000341948 ACTN2P35609 894 aa16.85■□□□□ 0.29
PCDHB13-201ENST00000341948 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
PCDHB13-201ENST00000341948 GPKOWQ92917 476 aaPredicted RBP eCLIP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms