RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 ATP2C2O75185 946 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 GNA11P29992 359 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 PAK1Q13153 545 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 USH1GQ495M9 461 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 NELFBQ8WX92 580 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 SYMPKQ92797 1274 aaKnown RBP13.47□□□□□ -0.25
CDH5-201ENST00000341529 ALS2CR12Q96Q35 445 aa13.47□□□□□ -0.25
CDH5-201ENST00000341529 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
CDH5-201ENST00000341529 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.25
CDH5-201ENST00000341529 FAM114A1Q8IWE2 563 aa13.46□□□□□ -0.25
CDH5-201ENST00000341529 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.25
CDH5-201ENST00000341529 RAPGEF1Q13905 1077 aa13.46□□□□□ -0.25
CDH5-201ENST00000341529 ANKRD13CQ8N6S4 541 aa13.46□□□□□ -0.25
CDH5-201ENST00000341529 IFT81Q8WYA0 676 aa13.46□□□□□ -0.25
CDH5-201ENST00000341529 KAZALD1Q96I82 304 aa13.46□□□□□ -0.25
CDH5-201ENST00000341529 PIK3C2BO00750 1634 aa13.46□□□□□ -0.25
CDH5-201ENST00000341529 KIAA0754O94854 1291 aa13.46□□□□□ -0.26
CDH5-201ENST00000341529 MAP9Q49MG5 647 aa13.46□□□□□ -0.26
CDH5-201ENST00000341529 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 SF3A3Q12874 501 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDH5-201ENST00000341529 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 VPS36Q86VN1 386 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 CNGA4Q8IV77 575 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 RGS22Q8NE09 1264 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 RSPH14Q9UHP6 348 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 ARHGAP6O43182 974 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 KRT86O43790 486 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 ERLIN2O94905 339 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 POLR1AO95602 1720 aaPredicted RBP13.45□□□□□ -0.26
CDH5-201ENST00000341529 TECP42680 631 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDH5-201ENST00000341529 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 NMT2O60551 498 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 ATG9AQ7Z3C6 839 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 LRWD1Q9UFC0 647 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 CYP2D6P10635 497 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 CAPN2P17655 700 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 CDC27P30260 824 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 SNX29Q8TEQ0 813 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 MRFAP1L1Q96HT8 127 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 PYM1Q9BRP8 204 aaKnown RBP13.45□□□□□ -0.26
CDH5-201ENST00000341529 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
CDH5-201ENST00000341529 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 FOXN1O15353 648 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 CIAO1O76071 339 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 PLEKHA8P1O95397 391 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 FOXO4P98177 505 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
CDH5-201ENST00000341529 SMCO2A6NFE2 343 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 SH2B2O14492 632 aaPredicted RBP13.44□□□□□ -0.26
CDH5-201ENST00000341529 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 EYA3Q99504 573 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 GPR108Q9NPR9 543 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
CDH5-201ENST00000341529 USP27XA6NNY8 438 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 APBA3O96018 575 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
CDH5-201ENST00000341529 NEK11Q8NG66 645 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 PDLIM2Q96JY6 352 aa13.44□□□□□ -0.26
CDH5-201ENST00000341529 NEDD4P46934 1319 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 UBE2Q2LH0YL09 131 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 TACC1O75410 805 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
CDH5-201ENST00000341529 FAM196AQ6ZSG2 479 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 KIAA0825Q8IV33 1275 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 TXLNBQ8N3L3 684 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 SENP2Q9HC62 589 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 USP31Q70CQ4 1352 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 PRDX5P30044 214 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 RNF187Q5TA31 235 aaPredicted RBP13.43□□□□□ -0.26
CDH5-201ENST00000341529 OGFRQ9NZT2 677 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 DDX39AO00148 427 aaKnown RBP13.43□□□□□ -0.26
CDH5-201ENST00000341529 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
CDH5-201ENST00000341529 COL9A3Q14050 684 aaPredicted RBP13.43□□□□□ -0.26
CDH5-201ENST00000341529 NONOQ15233 471 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDH5-201ENST00000341529 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 MYO6Q9UM54 1294 aa13.43□□□□□ -0.26
CDH5-201ENST00000341529 FRMPD1Q5SYB0 1578 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 USP17L3A6NCW0 530 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 USP17L4A6NCW7 530 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 GJC1P36383 396 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 PDIA6Q15084 440 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 USP17L1Q7RTZ2 530 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 CABP7Q86V35 215 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 SETBP1Q9Y6X0 1596 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
CDH5-201ENST00000341529 TMEM232C9JQI7 657 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms