RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 IDEP14735 1019 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 UBXN1Q04323 297 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 GOLGA6L10A6NI86 522 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 ERCC5P28715 1186 aaPredicted RBP13.2□□□□□ -0.3
TRAK1-202ENST00000341421 RFC4P35249 363 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 ASIC1P78348 528 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 PAK1Q13153 545 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 ZNF569Q5MCW4 686 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 ZSCAN10Q96SZ4 725 aaPredicted RBP13.2□□□□□ -0.3
TRAK1-202ENST00000341421 FANCLQ9NW38 375 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 AKAP12Q02952 1782 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 PHACTR2O75167 634 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 DNAJC21Q5F1R6 531 aaKnown RBP13.19□□□□□ -0.3
TRAK1-202ENST00000341421 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 STK36Q9NRP7 1315 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 MCAMP43121 646 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 PI16Q6UXB8 463 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
TRAK1-202ENST00000341421 PLA2G12BQ9BX93 195 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 ARPP21Q9UBL0 812 aaPredicted RBP13.19□□□□□ -0.3
TRAK1-202ENST00000341421 STX10O60499 249 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 DDAH1O94760 285 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 CTNND2Q9UQB3 1225 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
TRAK1-202ENST00000341421 MMP1P03956 469 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 ALX1Q15699 326 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 CCDC96Q2M329 555 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 NYAP1Q6ZVC0 841 aa13.19□□□□□ -0.3
TRAK1-202ENST00000341421 EBAG9O00559 213 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 ERLIN2O94905 339 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 RABGGTAQ92696 567 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 NGLY1Q96IV0 654 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
TRAK1-202ENST00000341421 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 PRDM1O75626 825 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 BCAMP50895 628 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
TRAK1-202ENST00000341421 VPS36Q86VN1 386 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 AKR1B10O60218 316 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 CCDC40Q4G0X9 1142 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
TRAK1-202ENST00000341421 PIGBQ92521 554 aa13.18□□□□□ -0.3
TRAK1-202ENST00000341421 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
TRAK1-202ENST00000341421 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 RCAN1P53805 252 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 SPATA1Q5VX52 437 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 GPHNQ9NQX3 736 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 DLG5Q8TDM6 1919 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 SEMA3EO15041 775 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 ZSCAN29Q8IWY8 852 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 CHRNDQ07001 517 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 KIF5AQ12840 1032 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 ZBTB9Q96C00 473 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 GSDMAQ96QA5 445 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 ZSWIM5Q9P217 1185 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 ZNF76P36508 570 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 MAGEA9P43362 315 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 TRAPPC10P48553 1259 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
TRAK1-202ENST00000341421 PPP2R2CQ9Y2T4 447 aa13.17□□□□□ -0.3
TRAK1-202ENST00000341421 TACC1O75410 805 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 ST5P78524 1137 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-202ENST00000341421 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-202ENST00000341421 SLC4A8Q2Y0W8 1093 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 ENOX1Q8TC92 643 aaKnown RBP13.16□□□□□ -0.3
TRAK1-202ENST00000341421 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-202ENST00000341421 NT5C2P49902 561 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 NUP58Q9BVL2 599 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 USP17L21D6R901 530 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 IQCB1Q15051 598 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
TRAK1-202ENST00000341421 KRT79Q5XKE5 535 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms