RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 IFIT1BQ5T764 474 aaKnown RBP24.18■■□□□ 1.46
CLDND1-201ENST00000341181 APOA5Q6Q788 366 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 NFXL1Q6ZNB6 911 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 CDCA5Q96FF9 252 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 CCDC17Q96LX7 622 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 MTA3Q9BTC8 594 aa24.18■■□□□ 1.46
CLDND1-201ENST00000341181 EVCP57679 992 aa24.17■■□□□ 1.46
CLDND1-201ENST00000341181 MTMR4Q9NYA4 1195 aa24.17■■□□□ 1.46
CLDND1-201ENST00000341181 TAOK2Q9UL54 1235 aa24.17■■□□□ 1.46
CLDND1-201ENST00000341181 GOLGA8BA8MQT2 603 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 TRAF5O00463 557 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 NT5C2P49902 561 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 RASGRP2Q7LDG7 609 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 IL27Q8NEV9 243 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 HPS5Q9UPZ3 1129 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 PDIA3P30101 505 aaKnown RBP24.16■■□□□ 1.46
CLDND1-201ENST00000341181 INPP5BP32019 993 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 RAB3GAP1Q15042 981 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 CCDC84Q86UT8 332 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-201ENST00000341181 MICU3Q86XE3 530 aa24.16■■□□□ 1.46
CLDND1-201ENST00000341181 NCOA5Q9HCD5 579 aaKnown RBP24.16■■□□□ 1.46
CLDND1-201ENST00000341181 CAP2P40123 477 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 CDC37L1Q7L3B6 337 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 ZBTB21Q9ULJ3 1066 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 ATAD5Q96QE3 1844 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 DCAF15Q66K64 600 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 TMEM179Q6ZVK1 233 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 LDHDQ86WU2 507 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 CCDC144CPQ8IYA2 1237 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 CHMP4CQ96CF2 233 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 WRNIP1Q96S55 665 aa24.15■■□□□ 1.46
CLDND1-201ENST00000341181 CCDC69A6NI79 296 aa24.14■■□□□ 1.45
CLDND1-201ENST00000341181 NOVP48745 357 aa24.14■■□□□ 1.45
CLDND1-201ENST00000341181 CCT2P78371 535 aaKnown RBP24.14■■□□□ 1.45
CLDND1-201ENST00000341181 SUPT20HL1Q3ZLR7 823 aa24.14■■□□□ 1.45
CLDND1-201ENST00000341181 DGKHQ86XP1 1220 aa24.14■■□□□ 1.45
CLDND1-201ENST00000341181 CCDC83Q8IWF9 413 aa24.14■■□□□ 1.45
CLDND1-201ENST00000341181 ZNF654Q8IZM8 581 aa24.14■■□□□ 1.45
CLDND1-201ENST00000341181 TMEM47Q9BQJ4 181 aa24.14■■□□□ 1.45
CLDND1-201ENST00000341181 SCRN1Q12765 414 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 SIAH1Q8IUQ4 282 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 LRRC47Q8N1G4 583 aaKnown RBP24.13■■□□□ 1.45
CLDND1-201ENST00000341181 ZKSCAN4Q969J2 545 aaPredicted RBP24.13■■□□□ 1.45
CLDND1-201ENST00000341181 ZNF341Q9BYN7 854 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 SLC12A7Q9Y666 1083 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 ICA1Q05084 483 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 KLRG1Q96E93 195 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 PAPPA2Q9BXP8 1791 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 OTOFQ9HC10 1997 aa24.13■■□□□ 1.45
CLDND1-201ENST00000341181 ATP2B2Q01814 1243 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 ANKS1AQ92625 1134 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 GTF3C6Q969F1 213 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 ZNF274Q96GC6 653 aaPredicted RBP24.12■■□□□ 1.45
CLDND1-201ENST00000341181 TROAPQ12815 778 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 MOB2Q70IA6 237 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 PNMA1Q8ND90 353 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 HOOK2Q96ED9 719 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 SH2B1Q9NRF2 756 aaPredicted RBP24.12■■□□□ 1.45
CLDND1-201ENST00000341181 CLIP2Q9UDT6 1046 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 ZNF112Q9UJU3 913 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 MTMR7Q9Y216 660 aa24.12■■□□□ 1.45
CLDND1-201ENST00000341181 MYH4Q9Y623 1939 aa24.11■■□□□ 1.45
CLDND1-201ENST00000341181 PFKFB2O60825 505 aa24.11■■□□□ 1.45
CLDND1-201ENST00000341181 USP2O75604 605 aaPredicted RBP24.11■■□□□ 1.45
CLDND1-201ENST00000341181 TTLL1O95922 423 aa24.11■■□□□ 1.45
CLDND1-201ENST00000341181 EEF2P13639 858 aaKnown RBP24.11■■□□□ 1.45
CLDND1-201ENST00000341181 CUL4AQ13619 759 aa24.11■■□□□ 1.45
CLDND1-201ENST00000341181 ZSCAN31Q96LW9 406 aaPredicted RBP24.11■■□□□ 1.45
CLDND1-201ENST00000341181 KAT14Q9H8E8 782 aa24.11■■□□□ 1.45
CLDND1-201ENST00000341181 CABP5Q9NP86 173 aa24.11■■□□□ 1.45
CLDND1-201ENST00000341181 ZBTB43O43298 467 aa24.1■■□□□ 1.45
CLDND1-201ENST00000341181 PPFIA3O75145 1194 aa24.1■■□□□ 1.45
CLDND1-201ENST00000341181 TMTC2Q8N394 836 aa24.1■■□□□ 1.45
CLDND1-201ENST00000341181 NUP133Q8WUM0 1156 aa24.1■■□□□ 1.45
CLDND1-201ENST00000341181 KANSL2Q9H9L4 492 aa24.1■■□□□ 1.45
CLDND1-201ENST00000341181 GPBP1L1Q9HC44 474 aaPredicted RBP24.1■■□□□ 1.45
CLDND1-201ENST00000341181 DOCK1Q14185 1865 aa24.1■■□□□ 1.45
CLDND1-201ENST00000341181 NFKBIBQ15653 356 aa24.1■■□□□ 1.45
CLDND1-201ENST00000341181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.1■■□□□ 1.45
CLDND1-201ENST00000341181 A0A1W2PRG0 241 aa24.09■■□□□ 1.45
CLDND1-201ENST00000341181 CTNND1O60716 968 aaKnown RBP24.09■■□□□ 1.45
CLDND1-201ENST00000341181 CDC27P30260 824 aa24.09■■□□□ 1.45
CLDND1-201ENST00000341181 METAP2P50579 478 aaKnown RBP eCLIP24.09■■□□□ 1.45
CLDND1-201ENST00000341181 ECE1P42892 770 aa24.09■■□□□ 1.45
CLDND1-201ENST00000341181 CCDC178Q5BJE1 867 aa24.09■■□□□ 1.45
CLDND1-201ENST00000341181 CATIPQ7Z7H3 387 aa24.09■■□□□ 1.45
CLDND1-201ENST00000341181 ZNF408Q9H9D4 720 aa24.09■■□□□ 1.45
CLDND1-201ENST00000341181 FAM217BQ9NTX9 383 aaPredicted RBP24.09■■□□□ 1.45
CLDND1-201ENST00000341181 GOLGA8AA7E2F4 631 aa24.08■■□□□ 1.45
CLDND1-201ENST00000341181 ASNSP08243 561 aa24.08■■□□□ 1.45
CLDND1-201ENST00000341181 TOP1P11387 765 aaKnown RBP24.08■■□□□ 1.45
CLDND1-201ENST00000341181 ACER1Q8TDN7 264 aa24.08■■□□□ 1.45
CLDND1-201ENST00000341181 ADD1P35611 737 aaKnown RBP24.08■■□□□ 1.44
CLDND1-201ENST00000341181 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.08■■□□□ 1.44
CLDND1-201ENST00000341181 SCYL3Q8IZE3 742 aa24.07■■□□□ 1.44
CLDND1-201ENST00000341181 NYAP2Q9P242 653 aa24.07■■□□□ 1.44
CLDND1-201ENST00000341181 NID2Q14112 1375 aa24.07■■□□□ 1.44
CLDND1-201ENST00000341181 PPP1R12BO60237 982 aaPredicted RBP24.06■■□□□ 1.44
CLDND1-201ENST00000341181 CTDNEP1O95476 244 aa24.06■■□□□ 1.44
CLDND1-201ENST00000341181 HSP90AA1P07900 732 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms