RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 UNCXA6NJT0 531 aa15.65■□□□□ 0.1
TUBD1-202ENST00000340993 BTBD19C9JJ37 291 aa15.65■□□□□ 0.1
TUBD1-202ENST00000340993 SREBF2Q12772 1141 aa15.65■□□□□ 0.1
TUBD1-202ENST00000340993 TREML2Q5T2D2 321 aa15.65■□□□□ 0.1
TUBD1-202ENST00000340993 TMEM179Q6ZVK1 233 aa15.65■□□□□ 0.1
TUBD1-202ENST00000340993 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.65■□□□□ 0.1
TUBD1-202ENST00000340993 CTNNA3Q9UI47 895 aa15.65■□□□□ 0.1
TUBD1-202ENST00000340993 A0A1W2PRG0 241 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 B4E1Z4 1266 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 CYP21A2P08686 494 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 CETPP11597 493 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 AKNAD1Q5T1N1 836 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 IFNL1Q8IU54 200 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 LRRC47Q8N1G4 583 aaKnown RBP15.64■□□□□ 0.1
TUBD1-202ENST00000340993 CEP95Q96GE4 821 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.1
TUBD1-202ENST00000340993 ISY1Q9ULR0 285 aaKnown RBP15.64■□□□□ 0.1
TUBD1-202ENST00000340993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.64■□□□□ 0.1
TUBD1-202ENST00000340993 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.1
TUBD1-202ENST00000340993 ZMYM6O95789 1325 aa15.64■□□□□ 0.09
TUBD1-202ENST00000340993 GREB1LQ9C091 1923 aaPredicted RBP15.64■□□□□ 0.09
TUBD1-202ENST00000340993 USP17L10C9JJH3 530 aa15.64■□□□□ 0.09
TUBD1-202ENST00000340993 EEF2P13639 858 aaKnown RBP15.64■□□□□ 0.09
TUBD1-202ENST00000340993 MAP2K1Q02750 393 aaPredicted RBP15.64■□□□□ 0.09
TUBD1-202ENST00000340993 R3HDMLQ9H3Y0 253 aa15.64■□□□□ 0.09
TUBD1-202ENST00000340993 RNF186Q9NXI6 227 aa15.64■□□□□ 0.09
TUBD1-202ENST00000340993 ANAPC4Q9UJX5 808 aa15.64■□□□□ 0.09
TUBD1-202ENST00000340993 KCNH4Q9UQ05 1017 aa15.64■□□□□ 0.09
TUBD1-202ENST00000340993 CASP8AP2Q9UKL3 1982 aa15.64■□□□□ 0.09
TUBD1-202ENST00000340993 A0A0G2JLL6 359 aaPredicted RBP15.63■□□□□ 0.09
TUBD1-202ENST00000340993 FOXN1O15353 648 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 KDM4AO75164 1064 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 CHST3Q7LGC8 479 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 PRRT2Q7Z6L0 340 aaPredicted RBP15.63■□□□□ 0.09
TUBD1-202ENST00000340993 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 STAG1Q8WVM7 1258 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 MAP4K1Q92918 833 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 CCDC17Q96LX7 622 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 STX8Q9UNK0 236 aa15.63■□□□□ 0.09
TUBD1-202ENST00000340993 CYP2C8P10632 490 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 BACE1P56817 501 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 MOGSQ13724 837 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 KIAA1755Q5JYT7 1200 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 STOX1Q6ZVD7 989 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 RASGRP2Q7LDG7 609 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 WBP1LQ9NX94 342 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 TMOD4Q9NZQ9 345 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 LOC285556D6RIA3 1793 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 PDHXO00330 501 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 CXCL11O14625 94 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 SLC27A2O14975 620 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 COL9A3Q14050 684 aaPredicted RBP15.62■□□□□ 0.09
TUBD1-202ENST00000340993 TAF1CQ15572 869 aaPredicted RBP15.62■□□□□ 0.09
TUBD1-202ENST00000340993 CREB3L3Q68CJ9 461 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 SIAH1Q8IUQ4 282 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 ARHGEF10LQ9HCE6 1279 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 EMILIN3Q9NT22 766 aa15.62■□□□□ 0.09
TUBD1-202ENST00000340993 E7EWF7 191 aa15.61■□□□□ 0.09
TUBD1-202ENST00000340993 PEX10O60683 326 aa15.61■□□□□ 0.09
TUBD1-202ENST00000340993 TM4SF4P48230 202 aa15.61■□□□□ 0.09
TUBD1-202ENST00000340993 CRHR2Q13324 411 aa15.61■□□□□ 0.09
TUBD1-202ENST00000340993 GPAT2Q6NUI2 795 aa15.61■□□□□ 0.09
TUBD1-202ENST00000340993 NUP88Q99567 741 aaPredicted RBP15.61■□□□□ 0.09
TUBD1-202ENST00000340993 WDR18Q9BV38 432 aa15.61■□□□□ 0.09
TUBD1-202ENST00000340993 RNF41Q9H4P4 317 aaPredicted RBP15.61■□□□□ 0.09
TUBD1-202ENST00000340993 IL17RBQ9NRM6 502 aa15.61■□□□□ 0.09
TUBD1-202ENST00000340993 NEDD1Q8NHV4 660 aa15.6■□□□□ 0.09
TUBD1-202ENST00000340993 KANSL2Q9H9L4 492 aa15.6■□□□□ 0.09
TUBD1-202ENST00000340993 CENPFP49454 3210 aa15.6■□□□□ 0.09
TUBD1-202ENST00000340993 ORC4O43929 436 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 OTUD7BQ6GQQ9 843 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 CYB5R4Q7L1T6 521 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 ESR2Q92731 530 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 TANGO6Q9C0B7 1094 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 SEC24BO95487 1268 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 VCAM1P19320 739 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 LBX1P52954 281 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 TRDNQ13061 729 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 USP17L2Q6R6M4 530 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 FASTKD5Q7L8L6 764 aaKnown RBP15.59■□□□□ 0.09
TUBD1-202ENST00000340993 RALYLQ86SE5 291 aaKnown RBP15.59■□□□□ 0.09
TUBD1-202ENST00000340993 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 TCEANC2Q96MN5 208 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 LRRC2Q9BYS8 371 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 RPAP3Q9H6T3 665 aaPredicted RBP15.59■□□□□ 0.09
TUBD1-202ENST00000340993 GINM1Q9NU53 330 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 MTMR4Q9NYA4 1195 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 CPA4Q9UI42 421 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 ZSWIM8A7E2V4 1837 aa15.59■□□□□ 0.09
TUBD1-202ENST00000340993 IGKV6D-41A0A0C4DH26 115 aa15.58■□□□□ 0.08
TUBD1-202ENST00000340993 TESPA1A2RU30 521 aaPredicted RBP15.58■□□□□ 0.08
TUBD1-202ENST00000340993 TTLL1O95922 423 aa15.58■□□□□ 0.08
TUBD1-202ENST00000340993 ZSWIM5Q9P217 1185 aa15.58■□□□□ 0.08
TUBD1-202ENST00000340993 AGTPBP1Q9UPW5 1226 aa15.58■□□□□ 0.08
TUBD1-202ENST00000340993 REC8O95072 547 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 FGRP09769 529 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 CPA1P15085 419 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 INHBEP58166 350 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms