RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ALDH1L2Q3SY69 923 aa20.17■□□□□ 0.82
NECTIN1-202ENST00000340882 CRACR2BQ8N4Y2 399 aaPredicted RBP20.17■□□□□ 0.82
NECTIN1-202ENST00000340882 SNRKQ9NRH2 765 aa20.17■□□□□ 0.82
NECTIN1-202ENST00000340882 TRIM43BA6NCK2 446 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 SRGAP3O43295 1099 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 GH2P01242 217 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 HOXC6P09630 235 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 FOSL2P15408 326 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 PPP4CP60510 307 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 SMAD3P84022 425 aaKnown RBP20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 GRB14Q14449 540 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 TRIM60Q495X7 471 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 USP38Q8NB14 1042 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 C12orf42Q96LP6 360 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 PDLIM7Q9NR12 457 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 RAPGEFL1Q9UHV5 662 aa20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 NOB1Q9ULX3 412 aaKnown RBP20.16■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L15C9J2P7 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L13C9JLJ4 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L11C9JVI0 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L18D6R9N7 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L22D6RA61 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L17D6RBQ6 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L19D6RCP7 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L20D6RJB6 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 MSCO60682 206 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 ITGB8P26012 769 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L24Q0WX57 530 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 GORABQ5T7V8 394 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 NAA16Q6N069 864 aaPredicted RBP20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 CATSPERGQ6ZRH7 1159 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 GINM1Q9NU53 330 aa20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 ZNFX1Q9P2E3 1918 aaKnown RBP20.15■□□□□ 0.82
NECTIN1-202ENST00000340882 GLRX3O76003 335 aaKnown RBP20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 COL9A1P20849 921 aa20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 EPHB4P54760 987 aa20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 DYNLL1P63167 89 aaKnown RBP20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 CCNA1P78396 465 aa20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 SLFN5Q08AF3 891 aa20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 SNX17Q15036 470 aa20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 ACER1Q8TDN7 264 aa20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 NOL10Q9BSC4 688 aaKnown RBP20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 TRIM34Q9BYJ4 488 aa20.14■□□□□ 0.81
NECTIN1-202ENST00000340882 ZNF236Q9UL36 1845 aa20.13■□□□□ 0.81
NECTIN1-202ENST00000340882 E9PSI1 815 aa20.13■□□□□ 0.81
NECTIN1-202ENST00000340882 BAG3O95817 575 aa20.13■□□□□ 0.81
NECTIN1-202ENST00000340882 FERMT2Q96AC1 680 aa20.13■□□□□ 0.81
NECTIN1-202ENST00000340882 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
NECTIN1-202ENST00000340882 SPDYE16A6NNV3 312 aaPredicted RBP20.12■□□□□ 0.81
NECTIN1-202ENST00000340882 VCAM1P19320 739 aa20.12■□□□□ 0.81
NECTIN1-202ENST00000340882 ADCYAP1R1P41586 468 aa20.12■□□□□ 0.81
NECTIN1-202ENST00000340882 MTX1Q13505 466 aa20.12■□□□□ 0.81
NECTIN1-202ENST00000340882 PRAMEF19Q5SWL8 479 aa20.12■□□□□ 0.81
NECTIN1-202ENST00000340882 FEZ1Q99689 392 aa20.12■□□□□ 0.81
NECTIN1-202ENST00000340882 ANP32CO43423 234 aa20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 PLCG2P16885 1265 aa20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 GRIN2CQ14957 1233 aa20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 LBX2Q6XYB7 198 aa20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 ARRDC4Q8NCT1 418 aa20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 SYMPKQ92797 1274 aaKnown RBP20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 IVNS1ABPQ9Y6Y0 642 aa20.11■□□□□ 0.81
NECTIN1-202ENST00000340882 A0A0G2JMZ2 1700 aa20.1■□□□□ 0.81
NECTIN1-202ENST00000340882 KBTBD13C9JR72 458 aa20.1■□□□□ 0.81
NECTIN1-202ENST00000340882 COBLO75128 1261 aa20.1■□□□□ 0.81
NECTIN1-202ENST00000340882 CYP2E1P05181 493 aaPredicted RBP20.1■□□□□ 0.81
NECTIN1-202ENST00000340882 UQCRFS1P1P0C7P4 283 aa20.1■□□□□ 0.81
NECTIN1-202ENST00000340882 TATDN1Q6P1N9 297 aa20.1■□□□□ 0.81
NECTIN1-202ENST00000340882 HDAC5Q9UQL6 1122 aa20.1■□□□□ 0.81
NECTIN1-202ENST00000340882 HLA-DOAP06340 250 aa20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 ADORA2AP29274 412 aa20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 TLE2Q04725 743 aa20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 RAB3GAP1Q15042 981 aa20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 LRRC41Q15345 812 aa20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 MOV10L1Q9BXT6 1211 aaKnown RBP20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 KIAA1683Q9H0B3 1180 aa20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 RPAP3Q9H6T3 665 aaPredicted RBP20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 PIH1D3Q9NQM4 214 aaKnown RBP20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 MYO9BQ13459 2157 aa20.09■□□□□ 0.81
NECTIN1-202ENST00000340882 PNMA6EA0A0J9YXQ4 647 aa20.08■□□□□ 0.81
NECTIN1-202ENST00000340882 SEPT4O43236 478 aa20.08■□□□□ 0.81
NECTIN1-202ENST00000340882 OLFML2BQ68BL8 750 aa20.08■□□□□ 0.81
NECTIN1-202ENST00000340882 DPP9Q86TI2 863 aa20.08■□□□□ 0.81
NECTIN1-202ENST00000340882 API5Q9BZZ5 524 aaKnown RBP20.08■□□□□ 0.81
NECTIN1-202ENST00000340882 TNFRSF10AO00220 468 aa20.07■□□□□ 0.8
NECTIN1-202ENST00000340882 GUCY1A2P33402 732 aa20.07■□□□□ 0.8
NECTIN1-202ENST00000340882 FAM47AQ5JRC9 791 aa20.07■□□□□ 0.8
NECTIN1-202ENST00000340882 TJAP1Q5JTD0 557 aa20.07■□□□□ 0.8
NECTIN1-202ENST00000340882 RNPC3Q96LT9 517 aaKnown RBP20.07■□□□□ 0.8
NECTIN1-202ENST00000340882 DBNDD2Q9BQY9 259 aa20.07■□□□□ 0.8
NECTIN1-202ENST00000340882 PLXNA1Q9UIW2 1896 aa20.07■□□□□ 0.8
NECTIN1-202ENST00000340882 PARP14Q460N5 1801 aa20.06■□□□□ 0.8
NECTIN1-202ENST00000340882 ZAP70P43403 619 aa20.06■□□□□ 0.8
NECTIN1-202ENST00000340882 USP14P54578 494 aa20.06■□□□□ 0.8
NECTIN1-202ENST00000340882 C1orf53Q5VUE5 145 aa20.06■□□□□ 0.8
NECTIN1-202ENST00000340882 COL11A1P12107 1806 aaPredicted RBP20.06■□□□□ 0.8
NECTIN1-202ENST00000340882 TMEM265A0A087WTH1 108 aa20.05■□□□□ 0.8
NECTIN1-202ENST00000340882 ABCB5Q2M3G0 1257 aa20.05■□□□□ 0.8
NECTIN1-202ENST00000340882 CERKLQ49MI3 558 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms