RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FUT2Q10981 343 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 LARP1BQ659C4 914 aaKnown RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 CRACR2BQ8N4Y2 399 aaPredicted RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 ZNF396Q96N95 335 aaPredicted RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 DDX4Q9NQI0 724 aaKnown RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 MTMR4Q9NYA4 1195 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 ZDHHC9Q9Y397 364 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 BMP15O95972 392 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 DCAF15Q66K64 600 aa8.34□□□□□ -1.07
NUP43-201ENST00000340413 CCDC12Q8WUD4 166 aaPredicted RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 SCAND2PQ9GZW5 306 aaPredicted RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 FOXP1Q9H334 677 aaPredicted RBP8.34□□□□□ -1.07
NUP43-201ENST00000340413 PHIPQ8WWQ0 1821 aa8.34□□□□□ -1.08
NUP43-201ENST00000340413 H7C1D1 291 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 BAG4O95429 457 aaKnown RBP8.33□□□□□ -1.08
NUP43-201ENST00000340413 FDX1P10109 184 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 CPA1P15085 419 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 FBXO18Q8NFZ0 1043 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 SYT17Q9BSW7 474 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 CFAP45Q9UL16 551 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 RANBP6O60518 1105 aaKnown RBP8.33□□□□□ -1.08
NUP43-201ENST00000340413 CALML3P27482 149 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 PLCD1P51178 756 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 RESTQ13127 1097 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 BTNL9Q6UXG8 535 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 USP50Q70EL3 339 aaPredicted RBP8.33□□□□□ -1.08
NUP43-201ENST00000340413 SLC51AQ86UW1 340 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 FBXW7Q969H0 707 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 FHDC1Q9C0D6 1143 aaPredicted RBP8.33□□□□□ -1.08
NUP43-201ENST00000340413 IL17RBQ9NRM6 502 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 GPRC5DQ9NZD1 345 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 A0A0G2JMZ2 1700 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 SLC26A4O43511 780 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 U2AF2P26368 475 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■■■ 38.2
NUP43-201ENST00000340413 TRAPPC10P48553 1259 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 CCDC148Q8NFR7 591 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 MTMR8Q96EF0 704 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
NUP43-201ENST00000340413 CYP2D6P10635 497 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 NLGN2Q8NFZ4 835 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 ADARB2Q9NS39 739 aaKnown RBP8.32□□□□□ -1.08
NUP43-201ENST00000340413 TRIM29Q14134 588 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 NFKBIBQ15653 356 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 PNMA1Q8ND90 353 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 PRMT6Q96LA8 375 aaPredicted RBP8.32□□□□□ -1.08
NUP43-201ENST00000340413 RIOX1Q9H6W3 641 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 ORC3Q9UBD5 711 aaPredicted RBP8.32□□□□□ -1.08
NUP43-201ENST00000340413 PARP14Q460N5 1801 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 PSDA5PKW4 1024 aaPredicted RBP8.32□□□□□ -1.08
NUP43-201ENST00000340413 YEATS4O95619 227 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 FDPSP14324 419 aaKnown RBP8.32□□□□□ -1.08
NUP43-201ENST00000340413 NAP1L4Q99733 375 aaKnown RBP8.32□□□□□ -1.08
NUP43-201ENST00000340413 CABP5Q9NP86 173 aa8.32□□□□□ -1.08
NUP43-201ENST00000340413 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 GMPSP49915 693 aaPredicted RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 SCNN1DP51172 638 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 KRT85P78386 507 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 PFKFB3Q16875 520 aaPredicted RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 CERKLQ49MI3 558 aaPredicted RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 SH3BP5LQ7L8J4 393 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 ELOA2Q8IYF1 753 aaPredicted RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 C8orf76Q96K31 380 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 TMEM47Q9BQJ4 181 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.31□□□□□ -1.08
NUP43-201ENST00000340413 BRMS1Q9HCU9 246 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 WNT10BO00744 389 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 AKAP17AQ02040 695 aaKnown RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 KIF4BQ2VIQ3 1234 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 RBM26Q5T8P6 1007 aaKnown RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 ARHGEF10LQ9HCE6 1279 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 CTNND1O60716 968 aaKnown RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 RAD17O75943 681 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 LETM1O95202 739 aaPredicted RBP8.31□□□□□ -1.08
NUP43-201ENST00000340413 SAFBQ15424 915 aaKnown RBP eCLIP8.31□□□□□ -1.08
NUP43-201ENST00000340413 KLHL40Q2TBA0 621 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 NECAB1Q8N987 351 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 WDR18Q9BV38 432 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 DEFB129Q9H1M3 183 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 KCNQ5Q9NR82 932 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 POLR3EQ9NVU0 708 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 MAD2L2Q9UI95 211 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 EP400Q96L91 3159 aa8.31□□□□□ -1.08
NUP43-201ENST00000340413 H3BQV1 296 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 PARP1P09874 1014 aaKnown RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 NASPP49321 788 aaPredicted RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 IFFO2Q5TF58 517 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 BICD2Q8TD16 824 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 ZNF341Q9BYN7 854 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 CNOT7Q9UIV1 285 aaKnown RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 MYPNQ86TC9 1320 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 MMP1P03956 469 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 CDC27P30260 824 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 RBM5P52756 815 aaKnown RBP eCLIP8.3□□□□□ -1.08
NUP43-201ENST00000340413 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 ABCB5Q2M3G0 1257 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms