RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 RCAN1P53805 252 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 SLC4A8Q2Y0W8 1093 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 APOA5Q6Q788 366 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 IGDCC4Q8TDY8 1250 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 ESR2Q92731 530 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 TMEM39BQ9GZU3 492 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 TOMM22Q9NS69 142 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 NID2Q14112 1375 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 DTNBO60941 627 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 SLC3A2P08195 630 aaKnown RBP17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 RASA3Q14644 834 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 FAM83AQ86UY5 434 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 FAM151AQ8WW52 585 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 C8orf76Q96K31 380 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 LY9Q9HBG7 655 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 ZSWIM5Q9P217 1185 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 ORC3Q9UBD5 711 aaPredicted RBP17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 SLC12A7Q9Y666 1083 aa17.66■□□□□ 0.42
TUBB4B-201ENST00000340384 WTAPQ15007 396 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 PNMA8AQ86V59 439 aaPredicted RBP17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 ZC3H15Q8WU90 426 aaKnown RBP17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 UBAC1Q9BSL1 405 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 DEFB129Q9H1M3 183 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 TSPY26PQ9H489 355 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 BAZ2AQ9UIF9 1905 aaKnown RBP17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 CCDC196A0A1B0GTZ2 297 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 MINDY4BA8MYZ0 360 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 RRP12Q5JTH9 1297 aaKnown RBP17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 PRAMEF18Q5VWM3 479 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 LEO1Q8WVC0 666 aaPredicted RBP17.65■□□□□ 0.42
TUBB4B-201ENST00000340384 PITPNM2Q9BZ72 1349 aa17.64■□□□□ 0.42
TUBB4B-201ENST00000340384 ATRNL1Q5VV63 1379 aa17.64■□□□□ 0.41
TUBB4B-201ENST00000340384 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
TUBB4B-201ENST00000340384 WASF1Q92558 559 aa17.64■□□□□ 0.41
TUBB4B-201ENST00000340384 TMOD2Q9NZR1 351 aa17.64■□□□□ 0.41
TUBB4B-201ENST00000340384 ARPP21Q9UBL0 812 aaPredicted RBP17.64■□□□□ 0.41
TUBB4B-201ENST00000340384 STK36Q9NRP7 1315 aa17.64■□□□□ 0.41
TUBB4B-201ENST00000340384 POLR2AP24928 1970 aaKnown RBP17.63■□□□□ 0.41
TUBB4B-201ENST00000340384 ADM5C9JUS6 153 aa17.63■□□□□ 0.41
TUBB4B-201ENST00000340384 KIF3CO14782 793 aa17.63■□□□□ 0.41
TUBB4B-201ENST00000340384 FDPSP14324 419 aaKnown RBP17.63■□□□□ 0.41
TUBB4B-201ENST00000340384 BRAPQ7Z569 592 aa17.63■□□□□ 0.41
TUBB4B-201ENST00000340384 DYNLL2Q96FJ2 89 aa17.63■□□□□ 0.41
TUBB4B-201ENST00000340384 SIPA1L1O43166 1804 aa17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 NAV1Q8NEY1 1877 aa17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 GABPAQ06546 454 aa17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 MAP1SQ66K74 1059 aaPredicted RBP17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 METTL16Q86W50 562 aaKnown RBP17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 MICU3Q86XE3 530 aa17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 APOBEC3FQ8IUX4 373 aaKnown RBP17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 AMOTL1Q8IY63 956 aa17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 FBXO18Q8NFZ0 1043 aa17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 DNAJC18Q9H819 358 aa17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 COL2A1P02458 1487 aaPredicted RBP17.62■□□□□ 0.41
TUBB4B-201ENST00000340384 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 CCDC173Q0VFZ6 552 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 TRIM29Q14134 588 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 NBPF12Q5TAG4 269 aaPredicted RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 FAM173BQ6P4H8 233 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 DCPSQ96C86 337 aaKnown RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 GLIS2Q9BZE0 524 aaPredicted RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 FGRP09769 529 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 MYH1P12882 1939 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 FOSBP53539 338 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 TNFAIP1Q13829 316 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 KRT26Q7Z3Y9 468 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 STK11IPQ8N1F8 1099 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 SLC44A5Q8NCS7 719 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 PANK2Q9BZ23 570 aa17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 DHX36Q9H2U1 1008 aaKnown RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 GPBP1L1Q9HC44 474 aaPredicted RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 DDX19AQ9NUU7 478 aaKnown RBP17.61■□□□□ 0.41
TUBB4B-201ENST00000340384 SSC5DA1L4H1 1573 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 FAM196BA6NMK8 535 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 YY1P25490 414 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 TNNI2P48788 182 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 MAP3K10Q02779 954 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 RTN1Q16799 776 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 ALG1Q9BT22 464 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 RCOR1Q9UKL0 485 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
TUBB4B-201ENST00000340384 ROBO3Q96MS0 1386 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 ORC4O43929 436 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 CALM1P0DP23 149 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 CALM2P0DP24 149 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 CALM3P0DP25 149 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms