RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 NOVP48745 357 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 EHD4Q9H223 541 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 SPON1Q9HCB6 807 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 BAZ2BQ9UIF8 2168 aaKnown RBP24.65■■□□□ 1.54
VRK2-201ENST00000340157 CCDC178Q5BJE1 867 aa24.65■■□□□ 1.54
VRK2-201ENST00000340157 PNMA1Q8ND90 353 aa24.65■■□□□ 1.54
VRK2-201ENST00000340157 RGS22Q8NE09 1264 aa24.65■■□□□ 1.54
VRK2-201ENST00000340157 JDP2Q8WYK2 163 aa24.65■■□□□ 1.54
VRK2-201ENST00000340157 GZF1Q9H116 711 aaPredicted RBP24.65■■□□□ 1.54
VRK2-201ENST00000340157 KAT14Q9H8E8 782 aa24.65■■□□□ 1.54
VRK2-201ENST00000340157 CIAPIN1Q6FI81 312 aa24.64■■□□□ 1.54
VRK2-201ENST00000340157 TMTC3Q6ZXV5 915 aa24.64■■□□□ 1.54
VRK2-201ENST00000340157 CEP95Q96GE4 821 aa24.64■■□□□ 1.54
VRK2-201ENST00000340157 TMEM47Q9BQJ4 181 aa24.64■■□□□ 1.54
VRK2-201ENST00000340157 RBM28Q9NW13 759 aaKnown RBP24.64■■□□□ 1.54
VRK2-201ENST00000340157 SWAP70Q9UH65 585 aa24.64■■□□□ 1.54
VRK2-201ENST00000340157 HLA-DOAP06340 250 aa24.64■■□□□ 1.53
VRK2-201ENST00000340157 AKR1B1P15121 316 aa24.64■■□□□ 1.53
VRK2-201ENST00000340157 DHX36Q9H2U1 1008 aaKnown RBP24.64■■□□□ 1.53
VRK2-201ENST00000340157 HDAC9Q9UKV0 1011 aa24.64■■□□□ 1.53
VRK2-201ENST00000340157 ATRNL1Q5VV63 1379 aa24.64■■□□□ 1.53
VRK2-201ENST00000340157 KRT85P78386 507 aa24.63■■□□□ 1.53
VRK2-201ENST00000340157 KRT40Q6A162 431 aa24.63■■□□□ 1.53
VRK2-201ENST00000340157 TFIP11Q9UBB9 837 aaKnown RBP24.63■■□□□ 1.53
VRK2-201ENST00000340157 STX8Q9UNK0 236 aa24.63■■□□□ 1.53
VRK2-201ENST00000340157 IGKV6D-41A0A0C4DH26 115 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 SHTN1A0MZ66 631 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 KIF28PB7ZC32 967 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 COL2A1P02458 1487 aaPredicted RBP24.62■■□□□ 1.53
VRK2-201ENST00000340157 TRIM22Q8IYM9 498 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 OGFOD1Q8N543 542 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 SRBD1Q8N5C6 995 aaKnown RBP24.62■■□□□ 1.53
VRK2-201ENST00000340157 CNTNAP5Q8WYK1 1306 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 RNF26Q9BY78 433 aaPredicted RBP24.62■■□□□ 1.53
VRK2-201ENST00000340157 ENTPD3O75355 529 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 GSE1Q14687 1217 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 DLGAP5Q15398 846 aa24.62■■□□□ 1.53
VRK2-201ENST00000340157 CTCFLQ8NI51 663 aaPredicted RBP24.62■■□□□ 1.53
VRK2-201ENST00000340157 MYH4Q9Y623 1939 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 FAM196BA6NMK8 535 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 DEXIO95424 95 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 KIF23Q02241 960 aaPredicted RBP24.61■■□□□ 1.53
VRK2-201ENST00000340157 PKN1Q16512 942 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 MTMR14Q8NCE2 650 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 SHISA4Q96DD7 197 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 ZBED3Q96IU2 234 aaPredicted RBP24.61■■□□□ 1.53
VRK2-201ENST00000340157 PI4KBQ9UBF8 816 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 ZNF70Q9UC06 446 aaPredicted RBP24.61■■□□□ 1.53
VRK2-201ENST00000340157 SRCAPQ6ZRS2 3230 aa24.61■■□□□ 1.53
VRK2-201ENST00000340157 CLRN2A0PK11 232 aa24.6■■□□□ 1.53
VRK2-201ENST00000340157 GRM4Q14833 912 aa24.6■■□□□ 1.53
VRK2-201ENST00000340157 RASGRP2Q7LDG7 609 aa24.6■■□□□ 1.53
VRK2-201ENST00000340157 MAP3K14Q99558 947 aa24.6■■□□□ 1.53
VRK2-201ENST00000340157 DICER1Q9UPY3 1922 aaKnown RBP24.6■■□□□ 1.53
VRK2-201ENST00000340157 SPDYE2Q495Y8 402 aa24.6■■□□□ 1.53
VRK2-201ENST00000340157 CLEC10AQ8IUN9 316 aa24.6■■□□□ 1.53
VRK2-201ENST00000340157 TAOK2Q9UL54 1235 aa24.6■■□□□ 1.53
VRK2-201ENST00000340157 PRPF3O43395 683 aaKnown RBP24.59■■□□□ 1.53
VRK2-201ENST00000340157 METTL16Q86W50 562 aaKnown RBP24.59■■□□□ 1.53
VRK2-201ENST00000340157 ZSCAN29Q8IWY8 852 aaPredicted RBP24.59■■□□□ 1.53
VRK2-201ENST00000340157 STAG2Q8N3U4 1231 aa24.59■■□□□ 1.53
VRK2-201ENST00000340157 WASF1Q92558 559 aa24.59■■□□□ 1.53
VRK2-201ENST00000340157 FTOQ9C0B1 505 aaKnown RBP eCLIP24.59■■□□□ 1.53
VRK2-201ENST00000340157 FHDC1Q9C0D6 1143 aaPredicted RBP24.59■■□□□ 1.53
VRK2-201ENST00000340157 MTMR4Q9NYA4 1195 aa24.59■■□□□ 1.53
VRK2-201ENST00000340157 MAD2L2Q9UI95 211 aa24.59■■□□□ 1.53
VRK2-201ENST00000340157 SBF1O95248 1867 aa24.59■■□□□ 1.53
VRK2-201ENST00000340157 CNTNAP1P78357 1384 aa24.59■■□□□ 1.53
VRK2-201ENST00000340157 hCG_1642624A0A1W2PR95 340 aa24.58■■□□□ 1.53
VRK2-201ENST00000340157 FZD9O00144 591 aa24.58■■□□□ 1.53
VRK2-201ENST00000340157 SLC35G1Q2M3R5 365 aa24.58■■□□□ 1.53
VRK2-201ENST00000340157 LEO1Q8WVC0 666 aaPredicted RBP24.58■■□□□ 1.53
VRK2-201ENST00000340157 ELP1O95163 1332 aa24.58■■□□□ 1.52
VRK2-201ENST00000340157 TCP10L2B9ZVM9 353 aa24.58■■□□□ 1.52
VRK2-201ENST00000340157 TNIP1Q15025 636 aa24.58■■□□□ 1.52
VRK2-201ENST00000340157 SHROOM1Q2M3G4 852 aaPredicted RBP24.58■■□□□ 1.52
VRK2-201ENST00000340157 V9GY48 417 aaPredicted RBP24.58■■□□□ 1.52
VRK2-201ENST00000340157 MBD3O95983 291 aa24.57■■□□□ 1.52
VRK2-201ENST00000340157 TOP1P11387 765 aaKnown RBP24.57■■□□□ 1.52
VRK2-201ENST00000340157 USP28Q96RU2 1077 aa24.57■■□□□ 1.52
VRK2-201ENST00000340157 SCAND2PQ9GZW5 306 aaPredicted RBP24.57■■□□□ 1.52
VRK2-201ENST00000340157 RBM27Q9P2N5 1060 aaKnown RBP24.57■■□□□ 1.52
VRK2-201ENST00000340157 KIF5BP33176 963 aa24.56■■□□□ 1.52
VRK2-201ENST00000340157 UBE2HP62256 183 aa24.56■■□□□ 1.52
VRK2-201ENST00000340157 CSPP1Q1MSJ5 1256 aa24.56■■□□□ 1.52
VRK2-201ENST00000340157 CAVIN1Q6NZI2 390 aaKnown RBP24.56■■□□□ 1.52
VRK2-201ENST00000340157 TATDN1Q6P1N9 297 aa24.56■■□□□ 1.52
VRK2-201ENST00000340157 KCNJ14Q9UNX9 436 aa24.56■■□□□ 1.52
VRK2-201ENST00000340157 PALM3A6NDB9 673 aaPredicted RBP24.55■■□□□ 1.52
VRK2-201ENST00000340157 EGFRP00533 1210 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 ZNF280AP59817 542 aaPredicted RBP24.55■■□□□ 1.52
VRK2-201ENST00000340157 FOXP4Q8IVH2 680 aaPredicted RBP24.55■■□□□ 1.52
VRK2-201ENST00000340157 SPATA32Q96LK8 384 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 MYOZ2Q9NPC6 264 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 TMOD2Q9NZR1 351 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 MTMR7Q9Y216 660 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 WNT10BO00744 389 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 MMP1P03956 469 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 TRIM29Q14134 588 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 NBPF9Q3BBW0 867 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms