RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZNF592Q92610 1267 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 MYH6P13533 1939 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 CYP2D7A0A087X1C5 515 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
LITAF-201ENST00000339430 NR5A1Q13285 461 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 LONRF3Q496Y0 759 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 ZNF654Q8IZM8 581 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 WASF1Q92558 559 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 TIGD1Q96MW7 591 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 UBAC1Q9BSL1 405 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 TRMT1Q9NXH9 659 aaKnown RBP18.75■□□□□ 0.59
LITAF-201ENST00000339430 DUOX1Q9NRD9 1551 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 PDS5AQ29RF7 1337 aaKnown RBP18.75■□□□□ 0.59
LITAF-201ENST00000339430 NEMFO60524 1076 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 DPEP1P16444 411 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 ATP2B1P20020 1258 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 TOB1P50616 345 aaPredicted RBP18.75■□□□□ 0.59
LITAF-201ENST00000339430 GRIN1Q05586 938 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 SAFBQ15424 915 aaKnown RBP eCLIP18.75■□□□□ 0.59
LITAF-201ENST00000339430 TMC6Q7Z403 805 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 CD209Q9NNX6 404 aa18.75■□□□□ 0.59
LITAF-201ENST00000339430 CUTAO60888 179 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 CRACR2BQ8N4Y2 399 aaPredicted RBP18.74■□□□□ 0.59
LITAF-201ENST00000339430 RNF41Q9H4P4 317 aaPredicted RBP18.74■□□□□ 0.59
LITAF-201ENST00000339430 TNKSO95271 1327 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 FOXN1O15353 648 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 ATP1A3P13637 1013 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 TPM4P67936 248 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 METTL16Q86W50 562 aaKnown RBP18.74■□□□□ 0.59
LITAF-201ENST00000339430 FANCBQ8NB91 859 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 CNNM3Q8NE01 707 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.74■□□□□ 0.59
LITAF-201ENST00000339430 TUBE1Q9UJT0 475 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 KCNH3Q9ULD8 1083 aa18.74■□□□□ 0.59
LITAF-201ENST00000339430 SMTNL1A8MU46 457 aa18.73■□□□□ 0.59
LITAF-201ENST00000339430 MTERF4Q7Z6M4 381 aaKnown RBP18.73■□□□□ 0.59
LITAF-201ENST00000339430 KRI1Q8N9T8 703 aaKnown RBP18.73■□□□□ 0.59
LITAF-201ENST00000339430 OXER1Q8TDS5 423 aa18.73■□□□□ 0.59
LITAF-201ENST00000339430 C7orf43Q8WVR3 580 aa18.73■□□□□ 0.59
LITAF-201ENST00000339430 ZC3H12CQ9C0D7 883 aaKnown RBP18.73■□□□□ 0.59
LITAF-201ENST00000339430 NID2Q14112 1375 aa18.73■□□□□ 0.59
LITAF-201ENST00000339430 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
LITAF-201ENST00000339430 PRDM1O75626 825 aa18.73■□□□□ 0.59
LITAF-201ENST00000339430 DEXIO95424 95 aa18.73■□□□□ 0.59
LITAF-201ENST00000339430 IL1R1P14778 569 aa18.72■□□□□ 0.59
LITAF-201ENST00000339430 KCNA3P22001 575 aa18.72■□□□□ 0.59
LITAF-201ENST00000339430 TTLL6Q8N841 843 aa18.72■□□□□ 0.59
LITAF-201ENST00000339430 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
LITAF-201ENST00000339430 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
LITAF-201ENST00000339430 PCDHB6Q9Y5E3 794 aa18.72■□□□□ 0.59
LITAF-201ENST00000339430 C21orf2O43822 256 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 PRDX5P30044 214 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 CEP135Q66GS9 1140 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 FOXP4Q8IVH2 680 aaPredicted RBP18.71■□□□□ 0.59
LITAF-201ENST00000339430 ESR2Q92731 530 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 HSD3B7Q9H2F3 369 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 FAM237AA0A1B0GTK4 181 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 ZBTB22O15209 634 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 PRKCSHP14314 528 aaPredicted RBP18.71■□□□□ 0.59
LITAF-201ENST00000339430 GSDMDP57764 484 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 FANCCQ00597 558 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 DLEC1Q9Y238 1755 aa18.71■□□□□ 0.59
LITAF-201ENST00000339430 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 CCDC196A0A1B0GTZ2 297 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 EVX2Q03828 476 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 SEC23AQ15436 765 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 ARMCX5Q6P1M9 558 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 WDR66Q8TBY9 1149 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 ZNF384Q8TF68 577 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
LITAF-201ENST00000339430 PCDHA5Q9Y5H7 936 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 MECOMQ03112 1051 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 PTPN21Q16825 1174 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 ENAHQ8N8S7 591 aaPredicted RBP18.7■□□□□ 0.58
LITAF-201ENST00000339430 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 FOXP1Q9H334 677 aaPredicted RBP18.7■□□□□ 0.58
LITAF-201ENST00000339430 CABP5Q9NP86 173 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
LITAF-201ENST00000339430 PTPN14Q15678 1187 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 DOK7Q18PE1 504 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 DPF2Q92785 391 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 NSUN4Q96CB9 384 aaKnown RBP18.69■□□□□ 0.58
LITAF-201ENST00000339430 SHISA4Q96DD7 197 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 EYA3Q99504 573 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 COA1Q9GZY4 146 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 VPS54Q9P1Q0 977 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 FBXO2Q9UK22 296 aaPredicted RBP18.69■□□□□ 0.58
LITAF-201ENST00000339430 FAM205CA6NFA0 338 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 IKBKBO14920 756 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 POLR2DO15514 142 aaKnown RBP18.69■□□□□ 0.58
LITAF-201ENST00000339430 CTIFO43310 598 aaKnown RBP18.69■□□□□ 0.58
LITAF-201ENST00000339430 HSP90AA4PQ58FG1 418 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 PDILTQ8N807 584 aa18.69■□□□□ 0.58
LITAF-201ENST00000339430 TGFB2P61812 414 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 MYL5Q02045 173 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 RILPL1Q5EBL4 403 aa18.68■□□□□ 0.58
LITAF-201ENST00000339430 CCAR2Q8N163 923 aaKnown RBP18.68■□□□□ 0.58
LITAF-201ENST00000339430 CCDC112Q8NEF3 446 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms