RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 IVNS1ABPQ9Y6Y0 642 aa17.27■□□□□ 0.36
COMMD4-202ENST00000338995 MS4A1P11836 297 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 MAP2K5Q13163 448 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
COMMD4-202ENST00000338995 GPR153Q6NV75 609 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 CATSPERGQ6ZRH7 1159 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 AACSQ86V21 672 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 SLC17A8Q8NDX2 589 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 USP6NLQ92738 828 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 PORCNQ9H237 461 aa17.26■□□□□ 0.35
COMMD4-202ENST00000338995 MAGEB6P1A0A0J9YX57 407 aa17.25■□□□□ 0.35
COMMD4-202ENST00000338995 SLC15A5A6NIM6 579 aa17.25■□□□□ 0.35
COMMD4-202ENST00000338995 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
COMMD4-202ENST00000338995 ATP2B2Q01814 1243 aa17.25■□□□□ 0.35
COMMD4-202ENST00000338995 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
COMMD4-202ENST00000338995 HOXC10Q9NYD6 342 aa17.25■□□□□ 0.35
COMMD4-202ENST00000338995 TLR7Q9NYK1 1049 aaKnown RBP17.25■□□□□ 0.35
COMMD4-202ENST00000338995 MSCO60682 206 aa17.24■□□□□ 0.35
COMMD4-202ENST00000338995 PEX10O60683 326 aa17.24■□□□□ 0.35
COMMD4-202ENST00000338995 SHROOM1Q2M3G4 852 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-202ENST00000338995 CLASRPQ8N2M8 674 aaKnown RBP17.24■□□□□ 0.35
COMMD4-202ENST00000338995 SYN1P17600 705 aa17.23■□□□□ 0.35
COMMD4-202ENST00000338995 PTPREP23469 700 aa17.23■□□□□ 0.35
COMMD4-202ENST00000338995 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-202ENST00000338995 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
COMMD4-202ENST00000338995 LBX2Q6XYB7 198 aa17.23■□□□□ 0.35
COMMD4-202ENST00000338995 UBE2OQ9C0C9 1292 aaKnown RBP17.23■□□□□ 0.35
COMMD4-202ENST00000338995 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
COMMD4-202ENST00000338995 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
COMMD4-202ENST00000338995 STRNO43815 780 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 VCAM1P19320 739 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 CNGA1P29973 690 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 CCND3P30281 292 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-202ENST00000338995 MAGEA10P43363 369 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-202ENST00000338995 COG2Q14746 738 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 CCL14Q16627 93 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 LHX8Q68G74 356 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 TDHQ8IZJ6 230 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 LRCH3Q96II8 777 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 MCM9Q9NXL9 1143 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 SLC5A4Q9NY91 659 aa17.22■□□□□ 0.35
COMMD4-202ENST00000338995 HMMRO75330 724 aa17.21■□□□□ 0.35
COMMD4-202ENST00000338995 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
COMMD4-202ENST00000338995 PLCD1P51178 756 aa17.21■□□□□ 0.35
COMMD4-202ENST00000338995 LRIT3Q3SXY7 679 aa17.21■□□□□ 0.35
COMMD4-202ENST00000338995 DPP9Q86TI2 863 aa17.21■□□□□ 0.35
COMMD4-202ENST00000338995 ACER1Q8TDN7 264 aa17.21■□□□□ 0.35
COMMD4-202ENST00000338995 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
COMMD4-202ENST00000338995 RPAP3Q9H6T3 665 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-202ENST00000338995 NDUFB9Q9Y6M9 179 aa17.21■□□□□ 0.35
COMMD4-202ENST00000338995 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 SOX1O00570 391 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-202ENST00000338995 HOXC6P09630 235 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 COL6A1P12109 1028 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 RLBP1P12271 317 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 SHMT1P34896 483 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.2■□□□□ 0.34
COMMD4-202ENST00000338995 KIF1BPQ96EK5 621 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 LBHD1Q9BQE6 289 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-202ENST00000338995 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
COMMD4-202ENST00000338995 IL1RAPL2Q9NP60 686 aa17.2■□□□□ 0.34
COMMD4-202ENST00000338995 MYH1P12882 1939 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 CNMDO75829 334 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 PDE6AP16499 860 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 SEPT2Q15019 361 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-202ENST00000338995 ARRDC4Q8NCT1 418 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 LPAR1Q92633 364 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 SENP6Q9GZR1 1112 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-202ENST00000338995 SH2D4AQ9H788 454 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 PRKAG2Q9UGJ0 569 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 SWAP70Q9UH65 585 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
COMMD4-202ENST00000338995 PFASO15067 1338 aa17.19■□□□□ 0.34
COMMD4-202ENST00000338995 GRB14Q14449 540 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 POTEEQ6S8J3 1075 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 DEFB123Q8N688 67 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 TANGO6Q9C0B7 1094 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 ARHGEF10LQ9HCE6 1279 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 SIPA1L1O43166 1804 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 FOCADQ5VW36 1801 aa17.18■□□□□ 0.34
COMMD4-202ENST00000338995 PLXNB2O15031 1838 aa17.17■□□□□ 0.34
COMMD4-202ENST00000338995 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-202ENST00000338995 GOLIM4O00461 696 aa17.17■□□□□ 0.34
COMMD4-202ENST00000338995 RAB11FIP3O75154 756 aa17.17■□□□□ 0.34
COMMD4-202ENST00000338995 GABPAQ06546 454 aa17.17■□□□□ 0.34
COMMD4-202ENST00000338995 LRRC26Q2I0M4 334 aa17.17■□□□□ 0.34
COMMD4-202ENST00000338995 SHCBP1Q8NEM2 672 aa17.17■□□□□ 0.34
COMMD4-202ENST00000338995 CDK5RAP2Q96SN8 1893 aa17.17■□□□□ 0.34
COMMD4-202ENST00000338995 DNAJC2Q99543 621 aaKnown RBP17.17■□□□□ 0.34
COMMD4-202ENST00000338995 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD4-202ENST00000338995 ATP8A2Q9NTI2 1148 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms