RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
LRP1-202ENST00000338962 LINC00301Q8NCQ3 95 aa12.82□□□□□ -0.36
LRP1-202ENST00000338962 ORC4O43929 436 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 KINO60870 393 aaKnown RBP12.81□□□□□ -0.36
LRP1-202ENST00000338962 PDE4BQ07343 736 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 GRIK5Q16478 980 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 RBM43Q6ZSC3 357 aaKnown RBP12.81□□□□□ -0.36
LRP1-202ENST00000338962 CATIPQ7Z7H3 387 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 GJA3Q9Y6H8 435 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
LRP1-202ENST00000338962 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 DEXIO95424 95 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 USP5P45974 858 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 SCNN1DP51172 638 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 HDLBPQ00341 1268 aaKnown RBP12.81□□□□□ -0.36
LRP1-202ENST00000338962 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 TYRO3Q06418 890 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 ADALQ6DHV7 355 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 CCDC82Q8N4S0 544 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 FSIP1Q8NA03 581 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
LRP1-202ENST00000338962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.81□□□□□ -0.36
LRP1-202ENST00000338962 SPTLC2O15270 562 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 LDHCP07864 332 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
LRP1-202ENST00000338962 ZNF280AP59817 542 aaPredicted RBP12.8□□□□□ -0.36
LRP1-202ENST00000338962 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
LRP1-202ENST00000338962 HS1BP3Q53T59 392 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 ANO1Q5XXA6 986 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 SASS6Q6UVJ0 657 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 AMOTL1Q8IY63 956 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 CRACR2BQ8N4Y2 399 aaPredicted RBP12.8□□□□□ -0.36
LRP1-202ENST00000338962 MRPS27Q92552 414 aaKnown RBP12.8□□□□□ -0.36
LRP1-202ENST00000338962 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
LRP1-202ENST00000338962 MYH2Q9UKX2 1941 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 A0A1W2PQ27 194 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 A0A1W2PQ64 194 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 A0A1W2PQD8 194 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 UBE2Q2LH0YL09 131 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 CTAGE5O15320 804 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 CALM1P0DP23 149 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 CALM2P0DP24 149 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 CALM3P0DP25 149 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.363e-6■■□□□ 14.3
LRP1-202ENST00000338962 CERS3Q8IU89 383 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 KIAA0825Q8IV33 1275 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 CMTR1Q8N1G2 835 aaKnown RBP12.8□□□□□ -0.36
LRP1-202ENST00000338962 FAM200AQ8TCP9 573 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 GOLPH3LQ9H4A5 285 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 GPRC5DQ9NZD1 345 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 USP25Q9UHP3 1055 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 LAMB1P07942 1786 aa12.8□□□□□ -0.36
LRP1-202ENST00000338962 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 CYP2D6P10635 497 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 GUCY1A2P33402 732 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 AKAP17AQ02040 695 aaKnown RBP12.79□□□□□ -0.36
LRP1-202ENST00000338962 EVX2Q03828 476 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
LRP1-202ENST00000338962 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 SH3RF3Q8TEJ3 882 aaPredicted RBP12.79□□□□□ -0.36
LRP1-202ENST00000338962 CNOT7Q9UIV1 285 aaKnown RBP12.79□□□□□ -0.36
LRP1-202ENST00000338962 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 TTF2Q9UNY4 1162 aaKnown RBP12.79□□□□□ -0.36
LRP1-202ENST00000338962 ECM29Q5VYK3 1845 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 TSPY2A6NKD2 308 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 DDAH1O94760 285 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 MMP1P03956 469 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 PPP4CP60510 307 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 SLC4A8Q2Y0W8 1093 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 HHIPL2Q6UWX4 724 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
LRP1-202ENST00000338962 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
LRP1-202ENST00000338962 MRVI1Q9Y6F6 885 aa12.79□□□□□ -0.36
LRP1-202ENST00000338962 POTECB2RU33 542 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 NT5C2P49902 561 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 TROAPQ12815 778 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 HSP90AA2PQ14568 343 aaPredicted RBP12.78□□□□□ -0.36
LRP1-202ENST00000338962 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 C12orf60Q5U649 245 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 MTMR14Q8NCE2 650 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 ENGASEQ8NFI3 743 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRP1-202ENST00000338962 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
LRP1-202ENST00000338962 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
LRP1-202ENST00000338962 XBP1P17861 261 aa12.77□□□□□ -0.36
LRP1-202ENST00000338962 SLC39A14Q15043 492 aa12.77□□□□□ -0.36
LRP1-202ENST00000338962 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.36
LRP1-202ENST00000338962 MICALL2Q8IY33 904 aa12.77□□□□□ -0.36
LRP1-202ENST00000338962 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.36
LRP1-202ENST00000338962 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms