RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.42
RTN3-201ENST00000338850 MYO3BQ8WXR4 1341 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 IKBKBO14920 756 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 GPAA1O43292 621 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 FGAP02671 866 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 CMA1P23946 247 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 ANTXR2P58335 489 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 GORABQ5T7V8 394 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 DHX40Q8IX18 779 aaKnown RBP12.45□□□□□ -0.42
RTN3-201ENST00000338850 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
RTN3-201ENST00000338850 CCDC150Q8NCX0 1101 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 FAM13BQ9NYF5 915 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 PCDHA7Q9UN72 937 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 ANGEL1Q9UNK9 670 aaKnown RBP12.45□□□□□ -0.42
RTN3-201ENST00000338850 NDUFB9Q9Y6M9 179 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 MYH6P13533 1939 aa12.45□□□□□ -0.42
RTN3-201ENST00000338850 MROH5Q6ZUA9 1318 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 BECN2A8MW95 431 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 SNAP23O00161 211 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 ZNF213O14771 459 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 ZBTB22O15209 634 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 SPTLC2O15270 562 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 SLC10A3P09131 477 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 LIFRP42702 1097 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 ME1P48163 572 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 ZNF157P51786 506 aaPredicted RBP12.44□□□□□ -0.42
RTN3-201ENST00000338850 TPM4P67936 248 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 KIF23Q02241 960 aaPredicted RBP12.44□□□□□ -0.42
RTN3-201ENST00000338850 TRDNQ13061 729 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 STK38Q15208 465 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 NBPF9Q3BBW0 867 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 C11orf57Q6ZUT1 292 aaPredicted RBP12.44□□□□□ -0.42
RTN3-201ENST00000338850 C15orf52Q6ZUT6 534 aaKnown RBP12.44□□□□□ -0.42
RTN3-201ENST00000338850 LRRC8AQ8IWT6 810 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 OGFOD1Q8N543 542 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 ZNF594Q96JF6 807 aaPredicted RBP12.44□□□□□ -0.42
RTN3-201ENST00000338850 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 PUS3Q9BZE2 481 aaKnown RBP12.44□□□□□ -0.42
RTN3-201ENST00000338850 KIAA1468Q9P260 1216 aa12.44□□□□□ -0.42
RTN3-201ENST00000338850 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
RTN3-201ENST00000338850 MAST2Q6P0Q8 1798 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 KLF18A0A0U1RQI7 1052 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 WNT10BO00744 389 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
RTN3-201ENST00000338850 CHGBP05060 677 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 FKBP1BP68106 108 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 GTF2IP78347 998 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 SLC39A14Q15043 492 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 ANO1Q5XXA6 986 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 SPC24Q8NBT2 197 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 HELBQ8NG08 1087 aaPredicted RBP12.43□□□□□ -0.42
RTN3-201ENST00000338850 CD209Q9NNX6 404 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
RTN3-201ENST00000338850 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 SCAF8Q9UPN6 1271 aaKnown RBP12.43□□□□□ -0.42
RTN3-201ENST00000338850 HPSEQ9Y251 543 aa12.43□□□□□ -0.42
RTN3-201ENST00000338850 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
RTN3-201ENST00000338850 CPLX1O14810 134 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 PDE8BO95263 885 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 FGFR2P21802 821 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 ADORA1P30542 326 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 MCAMP43121 646 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 ZAP70P43403 619 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 MMP14P50281 582 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 NLRP12P59046 1061 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 CCT2P78371 535 aaKnown RBP12.42□□□□□ -0.42
RTN3-201ENST00000338850 AXDND1Q5T1B0 1012 aaPredicted RBP12.42□□□□□ -0.42
RTN3-201ENST00000338850 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 DRC7Q8IY82 874 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
RTN3-201ENST00000338850 WASF1Q92558 559 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 CNNM2Q9H8M5 875 aa12.42□□□□□ -0.42
RTN3-201ENST00000338850 NCOA5Q9HCD5 579 aaKnown RBP12.42□□□□□ -0.42
RTN3-201ENST00000338850 LAMB1P07942 1786 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 PAPPA2Q9BXP8 1791 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 CCP110O43303 1012 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 NRDCO43847 1150 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 GNAT2P19087 354 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.429e-6■□□□□ 9.5
RTN3-201ENST00000338850 CCZ1BP86790 482 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 CCZ1P86791 482 aaPredicted RBP12.41□□□□□ -0.42
RTN3-201ENST00000338850 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 PUM3Q15397 648 aaKnown RBP12.41□□□□□ -0.42
RTN3-201ENST00000338850 METTL24Q5JXM2 366 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 PRAMEF18Q5VWM3 479 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 SYNE3Q6ZMZ3 975 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
RTN3-201ENST00000338850 RASAL3Q86YV0 1011 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms