RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GRM4Q14833 912 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 AOC3Q16853 763 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 PPP4R3BQ5MIZ7 849 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 PNMA1Q8ND90 353 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 MXD3Q9BW11 206 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 IDI2Q9BXS1 227 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 OSBPL5Q9H0X9 879 aaPredicted RBP18.8■□□□□ 0.6
HPS1-202ENST00000338546 EHD4Q9H223 541 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 DHX36Q9H2U1 1008 aaKnown RBP18.8■□□□□ 0.6
HPS1-202ENST00000338546 PSME4Q14997 1843 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 HLA-DOAP06340 250 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 DPEP1P16444 411 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 GUCY1A2P33402 732 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 STK38Q15208 465 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 ANO1Q5XXA6 986 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 ADALQ6DHV7 355 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 MTFR1LQ9H019 292 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 TSPY26PQ9H489 355 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
HPS1-202ENST00000338546 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
HPS1-202ENST00000338546 POLD1P28340 1107 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 SCNN1DP51172 638 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 PKN1Q16512 942 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 NOSTRINQ8IVI9 506 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 JMYQ8N9B5 988 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 SLC44A5Q8NCS7 719 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 KCNQ5Q9NR82 932 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 SERPINB13Q9UIV8 391 aa18.78■□□□□ 0.6
HPS1-202ENST00000338546 CNTNAP5Q8WYK1 1306 aa18.77■□□□□ 0.6
HPS1-202ENST00000338546 PLEKHA8P1O95397 391 aa18.77■□□□□ 0.6
HPS1-202ENST00000338546 TOP1P11387 765 aaKnown RBP18.77■□□□□ 0.6
HPS1-202ENST00000338546 SMARCA1P28370 1054 aa18.77■□□□□ 0.6
HPS1-202ENST00000338546 SLC39A14Q15043 492 aa18.77■□□□□ 0.6
HPS1-202ENST00000338546 TMEM47Q9BQJ4 181 aa18.77■□□□□ 0.6
HPS1-202ENST00000338546 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
HPS1-202ENST00000338546 DDX4Q9NQI0 724 aaKnown RBP18.77■□□□□ 0.6
HPS1-202ENST00000338546 V9GY48 417 aaPredicted RBP18.77■□□□□ 0.6
HPS1-202ENST00000338546 SPTLC2O15270 562 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 PPP6R2O75170 966 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 LIG1P18858 919 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 ME1P48163 572 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 CEBPZQ03701 1054 aaKnown RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 PICALMQ13492 652 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 SF3A1Q15459 793 aaKnown RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 RILPL1Q5EBL4 403 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 KIAA0825Q8IV33 1275 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 DIS3L2Q8IYB7 885 aaKnown RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 SRBD1Q8N5C6 995 aaKnown RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 PIM2Q9P1W9 311 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 MORC2Q9Y6X9 1032 aaPredicted RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 CTAGE5O15320 804 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 RBM43Q6ZSC3 357 aaKnown RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 CMTR1Q8N1G2 835 aaKnown RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 CCDC82Q8N4S0 544 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 CCDC17Q96LX7 622 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 PHF20Q9BVI0 1012 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 CLSTN2Q9H4D0 955 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 BRMS1Q9HCU9 246 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 SH3GLB2Q9NR46 395 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.76■□□□□ 0.59
HPS1-202ENST00000338546 DACT1Q9NYF0 836 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 PCDHA7Q9UN72 937 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 CLIC4Q9Y696 253 aa18.76■□□□□ 0.59
HPS1-202ENST00000338546 COL2A1P02458 1487 aaPredicted RBP18.75■□□□□ 0.59
HPS1-202ENST00000338546 PALM3A6NDB9 673 aaPredicted RBP18.75■□□□□ 0.59
HPS1-202ENST00000338546 MAP3K11Q16584 847 aa18.75■□□□□ 0.59
HPS1-202ENST00000338546 PFKFB3Q16875 520 aaPredicted RBP18.75■□□□□ 0.59
HPS1-202ENST00000338546 CCDC73Q6ZRK6 1079 aa18.75■□□□□ 0.59
HPS1-202ENST00000338546 CCAR1Q8IX12 1150 aaKnown RBP18.75■□□□□ 0.59
HPS1-202ENST00000338546 ANP32BQ92688 251 aaKnown RBP18.75■□□□□ 0.59
HPS1-202ENST00000338546 FTOQ9C0B1 505 aaKnown RBP eCLIP18.75■□□□□ 0.59
HPS1-202ENST00000338546 RBSNQ9H1K0 784 aa18.75■□□□□ 0.59
HPS1-202ENST00000338546 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
HPS1-202ENST00000338546 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 YDJCA8MPS7 323 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 BTBD18B2RXH4 712 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 UBE2Q2LH0YL09 131 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 VIL1P09327 827 aaKnown RBP18.74■□□□□ 0.59
HPS1-202ENST00000338546 SCG2P13521 617 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 MMP14P50281 582 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 FAM160A1Q05DH4 1040 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 RSBN1LQ6PCB5 846 aaPredicted RBP18.74■□□□□ 0.59
HPS1-202ENST00000338546 MAD2L2Q9UI95 211 aa18.74■□□□□ 0.59
HPS1-202ENST00000338546 ENTPD3O75355 529 aa18.73■□□□□ 0.59
HPS1-202ENST00000338546 KRT2P35908 639 aa18.73■□□□□ 0.59
HPS1-202ENST00000338546 LARGE2Q8N3Y3 721 aa18.73■□□□□ 0.59
HPS1-202ENST00000338546 MRPS27Q92552 414 aaKnown RBP18.73■□□□□ 0.59
HPS1-202ENST00000338546 FUCA2Q9BTY2 467 aa18.73■□□□□ 0.59
HPS1-202ENST00000338546 TNMDQ9H2S6 317 aa18.73■□□□□ 0.59
HPS1-202ENST00000338546 PI4KBQ9UBF8 816 aa18.73■□□□□ 0.59
HPS1-202ENST00000338546 KCNJ14Q9UNX9 436 aa18.73■□□□□ 0.59
HPS1-202ENST00000338546 NR1I2O75469 434 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 CCDC192P0DO97 292 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 CALML3P27482 149 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 RBM5P52756 815 aaKnown RBP eCLIP18.72■□□□□ 0.59
HPS1-202ENST00000338546 PTPAQ15257 358 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 UVSSAQ2YD98 709 aa18.72■□□□□ 0.59
HPS1-202ENST00000338546 FOXP4Q8IVH2 680 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms