RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GPS2Q13227 327 aa9.32□□□□□ -0.92
HPS4-201ENST00000336873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.32□□□□□ -0.92
HPS4-201ENST00000336873 RIPOR2Q9Y4F9 1068 aa9.32□□□□□ -0.92
HPS4-201ENST00000336873 ILDR1Q86SU0 546 aaPredicted RBP9.32□□□□□ -0.92
HPS4-201ENST00000336873 ACRBPQ8NEB7 543 aa9.32□□□□□ -0.92
HPS4-201ENST00000336873 ZNF397Q8NF99 534 aaPredicted RBP9.32□□□□□ -0.92
HPS4-201ENST00000336873 NEK11Q8NG66 645 aa9.32□□□□□ -0.92
HPS4-201ENST00000336873 RPGRQ92834 1020 aaKnown RBP9.32□□□□□ -0.92
HPS4-201ENST00000336873 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
HPS4-201ENST00000336873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.32□□□□□ -0.922e-7■□□□□ 11.1
HPS4-201ENST00000336873 FER1L4A9Z1Z3 1794 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 CUTAO60888 179 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 CCDC175P0C221 793 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 KLRK1P26718 216 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 ETF1P62495 437 aaKnown RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 PPP2R3AQ06190 1150 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 CACNA2D4Q7Z3S7 1137 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 TCP11L1Q9NUJ3 509 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 FRMPD2Q68DX3 1309 aaPredicted RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 MEGF6O75095 1541 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 GSG1L2A8MUP6 293 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 AKR1B15C9JRZ8 316 aaPredicted RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 CCP110O43303 1012 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 CCNT1O60563 726 aaKnown RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 CACNB1Q02641 598 aaPredicted RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 CCDC181Q5TID7 509 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 TOGARAM2Q6ZUX3 1019 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 FAM107BQ9H098 131 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 EPB41L4AQ9HCS5 686 aaPredicted RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 ARFGAP3Q9NP61 516 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
HPS4-201ENST00000336873 PPP2R2CQ9Y2T4 447 aa9.31□□□□□ -0.92
HPS4-201ENST00000336873 TRIM49BA6NDI0 452 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 ZBTB22O15209 634 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 RPS8P62241 208 aaKnown RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 E4F1Q66K89 784 aaPredicted RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 SPECC1LQ69YQ0 1117 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 CERS3Q8IU89 383 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 CRACR2AQ9BSW2 395 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 KANSL2Q9H9L4 492 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 LY9Q9HBG7 655 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 MAN1B1Q9UKM7 699 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 GDAQ9Y2T3 454 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 SLIT1O75093 1534 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 NALCNQ8IZF0 1738 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 LDHBP07195 334 aaKnown RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 FMR1Q06787 632 aaKnown RBP eCLIP9.3□□□□□ -0.92
HPS4-201ENST00000336873 DTHD1Q6ZMT9 781 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 TMTC2Q8N394 836 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 CRACR2BQ8N4Y2 399 aaPredicted RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 IQUBQ8NA54 791 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 HPS3Q969F9 1004 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 ERO1AQ96HE7 468 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 ZSCAN10Q96SZ4 725 aaPredicted RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 ISCA1Q9BUE6 129 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 FAM207AQ9NSI2 230 aaPredicted RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 VPS18Q9P253 973 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 SYNRGQ9UMZ2 1314 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.3□□□□□ -0.92
HPS4-201ENST00000336873 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 AKR1B10O60218 316 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 TECP42680 631 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 SCNN1DP51172 638 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 UBE3CQ15386 1083 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 RASGRP2Q7LDG7 609 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 METTL16Q86W50 562 aaKnown RBP9.3□□□□□ -0.92
HPS4-201ENST00000336873 CLEC10AQ8IUN9 316 aa9.3□□□□□ -0.92
HPS4-201ENST00000336873 KIF2AO00139 706 aaPredicted RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 RBL2Q08999 1139 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 PLS1Q14651 629 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 TPTE2Q6XPS3 522 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 CIAO1O76071 339 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 CYP19A1P11511 503 aaPredicted RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 VEGFAP15692 232 aaPredicted RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 ZYXQ15942 572 aaKnown RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 NELFCDQ8IXH7 590 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 RUFY1Q96T51 708 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 NLRC4Q9NPP4 1024 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 OGFRQ9NZT2 677 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 PKD2L1Q9P0L9 805 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 MMP1P03956 469 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 KIF5BP33176 963 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 CCZ1BP86790 482 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 CCZ1P86791 482 aaPredicted RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 CYP27A1Q02318 531 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 PDE4DQ08499 809 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 TBC1D8BQ0IIM8 1120 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 CCDC122Q5T0U0 273 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 AK7Q96M32 723 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 WDR24Q96S15 920 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 BMP2KQ9NSY1 1161 aaPredicted RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 KIF13AQ9H1H9 1805 aa9.29□□□□□ -0.92
HPS4-201ENST00000336873 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.29□□□□□ -0.92
HPS4-201ENST00000336873 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms